RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 EPHX3Q9H6B9 360 aa18.33■□□□□ 0.52
NME1-208ENST00000487481 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
NME1-208ENST00000487481 COG5Q9UP83 839 aa18.33■□□□□ 0.52
NME1-208ENST00000487481 RIPK3Q9Y572 518 aa18.33■□□□□ 0.52
NME1-208ENST00000487481 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.52
NME1-208ENST00000487481 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 CABYRO75952 493 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 ARMCX2Q7L311 632 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
NME1-208ENST00000487481 FGD4Q96M96 766 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
NME1-208ENST00000487481 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
NME1-208ENST00000487481 MYOGP15173 224 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 ATP2A2P16615 1042 aaKnown RBP18.31■□□□□ 0.52
NME1-208ENST00000487481 CCL23P55773 120 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 CXCL17Q6UXB2 119 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 KATNBL1Q9H079 304 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 WNT8AQ9H1J5 351 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 MTCH2Q9Y6C9 303 aa18.31■□□□□ 0.52
NME1-208ENST00000487481 ZBBXA8MT70 800 aa18.3■□□□□ 0.52
NME1-208ENST00000487481 BEX3Q00994 111 aa18.3■□□□□ 0.52
NME1-208ENST00000487481 ITGA7Q13683 1181 aa18.3■□□□□ 0.52
NME1-208ENST00000487481 ANKRD35Q8N283 1001 aa18.3■□□□□ 0.52
NME1-208ENST00000487481 PRPF38AQ8NAV1 312 aaKnown RBP18.3■□□□□ 0.52
NME1-208ENST00000487481 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
NME1-208ENST00000487481 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
NME1-208ENST00000487481 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
NME1-208ENST00000487481 CYP2D7A0A087X1C5 515 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 USP17L12C9JPN9 530 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 USP17L21D6R901 530 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 GOLIM4O00461 696 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 PRKAB2O43741 272 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 MBD4O95243 580 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 PFKMP08237 780 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 TMEM67Q5HYA8 995 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 CCDC144CPQ8IYA2 1237 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 CPXCR1Q8N123 301 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 DDRGK1Q96HY6 314 aa18.29■□□□□ 0.52
NME1-208ENST00000487481 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
NME1-208ENST00000487481 ASTN1O14525 1302 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 TLL1O43897 1013 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 B4GALT4O60513 344 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 GPR37L1O60883 481 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 ZBED4O75132 1171 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 SLC4A3P48751 1232 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 ZKSCAN2Q63HK3 967 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 CHST13Q8NET6 341 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
NME1-208ENST00000487481 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
NME1-208ENST00000487481 GRIN2DO15399 1336 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.27■□□□□ 0.52
NME1-208ENST00000487481 ZEB2O60315 1214 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 NDUFB10O96000 172 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 CA3P07451 260 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 FSCN1Q16658 493 aaKnown RBP18.27■□□□□ 0.52
NME1-208ENST00000487481 NOL8Q76FK4 1167 aaKnown RBP18.27■□□□□ 0.52
NME1-208ENST00000487481 VWCEQ96DN2 955 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.27■□□□□ 0.52
NME1-208ENST00000487481 TRPV6Q9H1D0 765 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 SLC38A10Q9HBR0 1119 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
NME1-208ENST00000487481 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
NME1-208ENST00000487481 MYH7P12883 1935 aa18.27■□□□□ 0.51
NME1-208ENST00000487481 MYH4Q9Y623 1939 aa18.27■□□□□ 0.51
NME1-208ENST00000487481 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 ZNF316A6NFI3 1004 aaPredicted RBP18.26■□□□□ 0.51
NME1-208ENST00000487481 F5H6K3 240 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 RFXAPO00287 272 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 ADD2P35612 726 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 OAZ1P54368 228 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 KLRC3Q07444 240 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 HLA-CQ95604 372 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 SCLYQ96I15 445 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 AGBL1Q96MI9 1066 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 RAVER2Q9HCJ3 691 aaKnown RBP18.26■□□□□ 0.51
NME1-208ENST00000487481 C11orf16Q9NQ32 467 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 NYAP2Q9P242 653 aa18.26■□□□□ 0.51
NME1-208ENST00000487481 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
NME1-208ENST00000487481 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
NME1-208ENST00000487481 KIFC2Q96AC6 838 aa18.25■□□□□ 0.51
NME1-208ENST00000487481 IL1RAPL2Q9NP60 686 aa18.25■□□□□ 0.51
NME1-208ENST00000487481 SCN5AQ14524 2016 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 EPOPA6NHQ4 379 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 HSP90AB4PQ58FF6 505 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 SLC9A7Q96T83 725 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.24■□□□□ 0.51
NME1-208ENST00000487481 CERS4Q9HA82 394 aa18.24■□□□□ 0.51
NME1-208ENST00000487481 ARPP21Q9UBL0 812 aaPredicted RBP18.24■□□□□ 0.51
NME1-208ENST00000487481 COL4A4P53420 1690 aaPredicted RBP18.23■□□□□ 0.51
NME1-208ENST00000487481 FAM86C2PA6NEL3 165 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 ASB14A6NK59 587 aa18.23■□□□□ 0.51
NME1-208ENST00000487481 ACTN1P12814 892 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms