RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 DDX11Q96FC9 970 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 AGBL1Q96MI9 1066 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 CNPY2Q9Y2B0 182 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 ASTN1O14525 1302 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
RN7SL397P-201ENST00000487309 BAZ2BQ9UIF8 2168 aaKnown RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 CCSAPQ6IQ19 270 aaPredicted RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 MAMDC4Q6UXC1 1216 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 RNF180Q86T96 592 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 ZNF589Q86UQ0 364 aaPredicted RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 ANKRD35Q8N283 1001 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 SLC17A8Q8NDX2 589 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 FAM161BQ96MY7 647 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 GUCD1Q96NT3 240 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 ZNF287Q9HBT7 754 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 PRKAG2Q9UGJ0 569 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 GBF1Q92538 1859 aa11.34□□□□□ -0.59
RN7SL397P-201ENST00000487309 TSPY2A6NKD2 308 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 SLC1A4P43007 532 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 STAT2P52630 851 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 ACLYP53396 1101 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 ACVR2BQ13705 512 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 ARMCX2Q7L311 632 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 GMCL1Q96IK5 515 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 A1CFQ9NQ94 594 aaKnown RBP11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 RNF146Q9NTX7 359 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 CTDP1Q9Y5B0 961 aaPredicted RBP11.33□□□□□ -0.6
RN7SL397P-201ENST00000487309 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 CTAGE5O15320 804 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 SLC3A2P08195 630 aaKnown RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 CLTBP09497 229 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 OAZ1P54368 228 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 HAND2P61296 217 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 IKQ13123 557 aaPredicted RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 NMIQ13287 307 aaPredicted RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 KCNA10Q16322 511 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 TMEM63BQ5T3F8 832 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 TTBK2Q6IQ55 1244 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 FAM133AQ8N9E0 248 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 EVI5LQ96CN4 794 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 YTHDC1Q96MU7 727 aaKnown RBP11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 ACAD9Q9H845 621 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 FAM184BQ9ULE4 1060 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 PRR12Q9ULL5 1215 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
RN7SL397P-201ENST00000487309 KIAA0355O15063 1070 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 ORC4O43929 436 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 DUSP11O75319 330 aaKnown RBP11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 FGAP02671 866 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 C6orf222P0C671 652 aaPredicted RBP11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 ALAS1P13196 640 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 SLC16A2P36021 539 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 NOVP48745 357 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 BEX3Q00994 111 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 FAAP100Q0VG06 881 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 ALX1Q15699 326 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 STARD7Q9NQZ5 370 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 BDP1A6H8Y1 2624 aa11.31□□□□□ -0.6
RN7SL397P-201ENST00000487309 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 TRIP12Q14669 1992 aaPredicted RBP11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 FGRP09769 529 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 B4GALNT3Q6L9W6 998 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 CHURC1Q8WUH1 139 aa11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 TSEN34Q9BSV6 310 aaKnown RBP11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 UPF3AQ9H1J1 476 aaKnown RBP11.3□□□□□ -0.6
RN7SL397P-201ENST00000487309 ABHD16BQ9H3Z7 469 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms