RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 MFSD14BQ5SR56 506 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CCDC89Q8N998 374 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CACTINQ8WUQ7 758 aaKnown RBP16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CUEDC2Q9H467 287 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 MAP3K15Q6ZN16 1313 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 KDM5CP41229 1560 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 N4BP1O75113 896 aaKnown RBP16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CYP2J2P51589 502 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 POLR2FP61218 127 aaKnown RBP16.17■□□□□ 0.18
EPHB4-206ENST00000487222 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 TNNI1P19237 187 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 AFAP1L2Q8N4X5 818 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 TMEM94Q12767 1356 aa16.17■□□□□ 0.18
EPHB4-206ENST00000487222 CCDC38Q502W7 563 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 ANKRD42Q8N9B4 389 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 RNF34Q969K3 372 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 SLC39A2Q9NP94 309 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 USP6P35125 1406 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 USP40Q9NVE5 1235 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 NLRP1Q9C000 1473 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 GRK7Q8WTQ7 553 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
EPHB4-206ENST00000487222 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
EPHB4-206ENST00000487222 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 EEF1GP26641 437 aaKnown RBP16.16■□□□□ 0.18
EPHB4-206ENST00000487222 PDE6BP35913 854 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 ADAM9Q13443 819 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 C11orf57Q6ZUT1 292 aaPredicted RBP16.16■□□□□ 0.18
EPHB4-206ENST00000487222 MIER3Q7Z3K6 550 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 TUBGCP2Q9BSJ2 902 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 KLHL14Q9P2G3 628 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 CAPN7Q9Y6W3 813 aa16.16■□□□□ 0.18
EPHB4-206ENST00000487222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.15■□□□□ 0.18
EPHB4-206ENST00000487222 LAD1O00515 517 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 TROVE2P10155 538 aaKnown RBP eCLIP16.15■□□□□ 0.18
EPHB4-206ENST00000487222 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
EPHB4-206ENST00000487222 PRR16Q569H4 304 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 OTUD6AQ7L8S5 288 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 LINC00301Q8NCQ3 95 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 HOOK2Q96ED9 719 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 CRCPO75575 148 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 ATP1A2P50993 1020 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
EPHB4-206ENST00000487222 PDE11AQ9HCR9 933 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 PROSER3Q2NL68 480 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 NLRX1Q86UT6 975 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 SLC35F6Q8N357 371 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 MGARPQ8TDB4 240 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 TBC1D31Q96DN5 1066 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 CARD10Q9BWT7 1032 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
EPHB4-206ENST00000487222 PHKA1P46020 1223 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 TAF12Q16514 161 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 TEKT1Q969V4 418 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 VCXQ9H320 206 aa16.15■□□□□ 0.18
EPHB4-206ENST00000487222 CA8P35219 290 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 GTF2IP78347 998 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 KIF23Q02241 960 aaPredicted RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 PHLDB2Q86SQ0 1253 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 RETREG2Q8NC44 543 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 CNOT6LQ96LI5 555 aaKnown RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 RNF10Q8N5U6 811 aaKnown RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 KDM6BO15054 1643 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 ROBO2Q9HCK4 1378 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 TRIM37O94972 964 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 FAM178BQ8IXR5 827 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 DHTKD1Q96HY7 919 aaPredicted RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 DPH5Q9H2P9 285 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 KRT19P08727 400 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 SF3A3Q12874 501 aaKnown RBP eCLIP16.14■□□□□ 0.176e-7■■■■■ 27.5
EPHB4-206ENST00000487222 SEPT6Q14141 434 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 CCDC117Q8IWD4 279 aaPredicted RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 ATP2A3Q93084 1043 aa16.14■□□□□ 0.17
EPHB4-206ENST00000487222 BZW2Q9Y6E2 419 aaKnown RBP16.14■□□□□ 0.17
EPHB4-206ENST00000487222 IFNB1P01574 187 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 CASC4Q6P4E1 433 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.13■□□□□ 0.17
EPHB4-206ENST00000487222 CPSF2Q9P2I0 782 aaKnown RBP16.13■□□□□ 0.17
EPHB4-206ENST00000487222 LOC102724428A0A0B4J2F2 783 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 ADORA1P30542 326 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 SIK1P57059 783 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 CHRNDQ07001 517 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 PUS3Q9BZE2 481 aaKnown RBP16.13■□□□□ 0.17
EPHB4-206ENST00000487222 GOLGA8HP0CJ92 632 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 ADCY8P40145 1251 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 BRDTQ58F21 947 aaPredicted RBP16.13■□□□□ 0.17
EPHB4-206ENST00000487222 ANKRD13CQ8N6S4 541 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 GREM2Q9H772 168 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 GIPC1O14908 333 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 DLGAP5Q15398 846 aa16.13■□□□□ 0.17
EPHB4-206ENST00000487222 TYW1Q9NV66 732 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms