RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 ADCY7P51828 1080 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 BACE1P56817 501 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 JAG1P78504 1218 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 CDC37Q16543 378 aaPredicted RBP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 ADALQ6DHV7 355 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 FAM173BQ6P4H8 233 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 ARMC9Q7Z3E5 817 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 FBXO11Q86XK2 927 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 CDAN1Q8IWY9 1227 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 REXO1Q8N1G1 1221 aaKnown RBP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 SAMD3Q8N6K7 520 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 PRPF38AQ8NAV1 312 aaKnown RBP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 ACER1Q8TDN7 264 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 CUL5Q93034 780 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 TNFRSF25Q93038 417 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 MAF1Q9H063 256 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 GDPD2Q9HCC8 539 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 RIC8AQ9NPQ8 531 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 GJB4Q9NTQ9 266 aa8.24□□□□□ -1.09
CCNB3-206ENST00000487204 DDX19AQ9NUU7 478 aaKnown RBP8.24□□□□□ -1.09
CCNB3-206ENST00000487204 WDR90Q96KV7 1748 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 MYH4Q9Y623 1939 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 UBE2Q2LH0YL09 131 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 M0R2N6 131 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CUTAO60888 179 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 FOSP01100 380 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 VEGFAP15692 232 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 INPP5BP32019 993 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 SLC16A2P36021 539 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 ECE1P42892 770 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CEBPZQ03701 1054 aaKnown RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 NR5A1Q13285 461 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 NONOQ15233 471 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 NPY5RQ15761 445 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 MAP3K11Q16584 847 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 SHROOM1Q2M3G4 852 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 SLC35G1Q2M3R5 365 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 QRICH1Q2TAL8 776 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 EAPPQ56P03 285 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 FAM83BQ5T0W9 1011 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CCDC183Q5T5S1 534 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CCDC73Q6ZRK6 1079 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 ANKRD13AQ8IZ07 590 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 FERMT2Q96AC1 680 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CCDC34Q96HJ3 373 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 C12orf42Q96LP6 360 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 SLF1Q9BQI6 1058 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 PYM1Q9BRP8 204 aaKnown RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 PSTPIP2Q9H939 334 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 TMOD4Q9NZQ9 345 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 PRR12Q9ULL5 1215 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CTDP1Q9Y5B0 961 aaPredicted RBP8.23□□□□□ -1.09
CCNB3-206ENST00000487204 PCDHA1Q9Y5I3 950 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CLIC4Q9Y696 253 aa8.23□□□□□ -1.09
CCNB3-206ENST00000487204 CTAGE5O15320 804 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 CMA1P23946 247 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 FKBP1BP68106 108 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PPATQ06203 517 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 SPP2Q13103 211 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 AP3B2Q13367 1082 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 SH3D19Q5HYK7 790 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 TTC38Q5R3I4 469 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 ARL6IP4Q66PJ3 421 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 CAVIN1Q6NZI2 390 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 ERO1BQ86YB8 467 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 SPICE1Q8N0Z3 855 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 GPT2Q8TD30 523 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 OXER1Q8TDS5 423 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 MRPS27Q92552 414 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 CDCA5Q96FF9 252 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PHF12Q96QT6 1004 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 RANBP17Q9H2T7 1088 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 EHMT1Q9H9B1 1298 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 MAP3K20Q9NYL2 800 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PCDHA6Q9UN73 950 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 MRPL11Q9Y3B7 192 aaKnown RBP8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PCDHA8Q9Y5H6 950 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 ZHX2Q9Y6X8 837 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 MYH6P13533 1939 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 ABCB11O95342 1321 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 MYPNQ86TC9 1320 aa8.22□□□□□ -1.09
CCNB3-206ENST00000487204 PIK3CDO00329 1044 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 CXCL11O14625 94 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 ZBED4O75132 1171 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 GADD45BO75293 160 aaPredicted RBP8.21□□□□□ -1.1
CCNB3-206ENST00000487204 GCFC2P16383 781 aaKnown RBP8.21□□□□□ -1.1
CCNB3-206ENST00000487204 TOB1P50616 345 aaPredicted RBP8.21□□□□□ -1.1
CCNB3-206ENST00000487204 OAZ1P54368 228 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 FAM160A1Q05DH4 1040 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 MTMR2Q13614 643 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 GSE1Q14687 1217 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 PTPAQ15257 358 aa8.21□□□□□ -1.1
CCNB3-206ENST00000487204 PRAMEF18Q5VWM3 479 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms