RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PTPROQ16827 1216 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 DHX37Q8IY37 1157 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 ZNF655Q8N720 491 aaPredicted RBP7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 NINJ1Q92982 152 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 CCDC140Q96MF4 163 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 TRIT1Q9H3H1 467 aaKnown RBP7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 MKNK2Q9HBH9 465 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 ZSWIM5Q9P217 1185 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 PLAGL2Q9UPG8 496 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 PLAAQ9Y263 795 aa7.1□□□□□ -1.27
PRPF38A-203ENST00000487160 DNAJC25-GNG10A0A024R161 153 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 BLACEA4D250 179 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 H3BS24 57 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 GSC2O15499 205 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 RFPL3O75679 317 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 CEACAM5P06731 702 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 CD3EP07766 207 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 HMGB1P09429 215 aaKnown RBP7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 CYP4F3Q08477 520 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 MAP4K2Q12851 820 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 FNDC3BQ53EP0 1204 aaKnown RBP7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 SPACA3Q8IXA5 215 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 TMEM145Q8NBT3 493 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 KCTD13Q8WZ19 329 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 HSPA12BQ96MM6 686 aa7.09□□□□□ -1.27
PRPF38A-203ENST00000487160 STXBP3O00186 592 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 IRS4O14654 1257 aaPredicted RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 CYP26A1O43174 497 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 CPP00450 1065 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 SCG5P05408 212 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 C6orf222P0C671 652 aaPredicted RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 TPP2P29144 1249 aaPredicted RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 NOP2P46087 812 aaKnown RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 SCRN1Q12765 414 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 TSPYL5Q86VY4 417 aaPredicted RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 NIM1KQ8IY84 436 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 PLD6Q8N2A8 252 aaKnown RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 USHBP1Q8N6Y0 703 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 UBE2FQ969M7 185 aa7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 FCRL3Q96P31 734 aaPredicted RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 MRPL4Q9BYD3 311 aaKnown RBP7.08□□□□□ -1.28
PRPF38A-203ENST00000487160 AURKAO14965 403 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 IFNGR1P15260 489 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 VAV1P15498 845 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 BMP8BP34820 402 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 NTRK3Q16288 839 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 RSPO4Q2I0M5 234 aaPredicted RBP7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 TM4SF20Q53R12 229 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 NKAPLQ5M9Q1 402 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 SLC35F1Q5T1Q4 408 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 DENND5AQ6IQ26 1287 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 COPS5Q92905 334 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 MFSD3Q96ES6 412 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 C1orf159Q96HA4 380 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 SLC12A9Q9BXP2 914 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 TMX1Q9H3N1 280 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 GPRC5CQ9NQ84 441 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 SEMA3GQ9NS98 782 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 NDOR1Q9UHB4 597 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 COL4A3BPQ9Y5P4 624 aa7.07□□□□□ -1.28
PRPF38A-203ENST00000487160 C2orf71A6NGG8 1288 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 SYPP08247 313 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 MYCLP1P12525 358 aaPredicted RBP7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 IBSPP21815 317 aaPredicted RBP7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 GABREP78334 506 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 CPSF6Q16630 551 aaKnown RBP eCLIP7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 USP53Q70EK8 1073 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 ZDHHC13Q8IUH4 622 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 KREMEN2Q8NCW0 462 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 SLC7A14Q8TBB6 771 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 ZCRB1Q8TBF4 217 aaKnown RBP7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 NETO1Q8TDF5 533 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 FOXP3Q9BZS1 431 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 PCDH12Q9NPG4 1184 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 BACE2Q9Y5Z0 518 aa7.06□□□□□ -1.28
PRPF38A-203ENST00000487160 hCG_2014768A0A024R1R8 64 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 PRR19A6NJB7 356 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 ZNF205O95201 554 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 PROCP04070 461 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 THBDP07204 575 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 GSTM1P09488 218 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 SDSP20132 328 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 CLCN7P51798 805 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 PCBP3P57721 371 aaKnown RBP7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 IFI16Q16666 785 aaKnown RBP7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 GAB4Q2WGN9 574 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 THAP5Q7Z6K1 395 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 LINC00116Q8NCU8 138 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 PTPRN2Q92932 1015 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 BRINP2Q9C0B6 783 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 SLC52A2Q9HAB3 445 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 ZC3H7BQ9UGR2 993 aaKnown RBP7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 TCFL5Q9UL49 500 aa7.05□□□□□ -1.28
PRPF38A-203ENST00000487160 RNF112Q9ULX5 631 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms