RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 STAG2Q8N3U4 1231 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 REPS2Q8NFH8 660 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 ARHGAP39Q9C0H5 1083 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 MROH8Q9H579 483 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 FBXO40Q9UH90 709 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 CCPG1Q9ULG6 757 aa13.57□□□□□ -0.24
LINC00996-202ENST00000486954 ZSWIM8A7E2V4 1837 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 ICAM1P05362 532 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 NEK4P51957 841 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 TRAF1Q13077 416 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 RABEP1Q15276 862 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
LINC00996-202ENST00000486954 OTOP1Q7RTM1 612 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 PORCNQ9H237 461 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 SEC63Q9UGP8 760 aaKnown RBP13.56□□□□□ -0.24
LINC00996-202ENST00000486954 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
LINC00996-202ENST00000486954 PLXNB2O15031 1838 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 MYH6P13533 1939 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 ALAS1P13196 640 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 SNAP25P60880 206 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
LINC00996-202ENST00000486954 KCTD2Q14681 263 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 CHST13Q8NET6 341 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 RAET1EQ8TD07 263 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
LINC00996-202ENST00000486954 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 HOMER2Q9NSB8 354 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 SLC5A4Q9NY91 659 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 SRRDQ9UH36 339 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 NID2Q14112 1375 aa13.55□□□□□ -0.24
LINC00996-202ENST00000486954 CEP350Q5VT06 3117 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 ZBTB5O15062 677 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 STRNO43815 780 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 ST18O60284 1047 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 FCER1AP12319 257 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 SMARCA1P28370 1054 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 RGS2P41220 211 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 AK2P54819 239 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 PRKCZQ05513 592 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 QRICH1Q2TAL8 776 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 CPLX2Q6PUV4 134 aaKnown RBP13.54□□□□□ -0.24
LINC00996-202ENST00000486954 TMTC3Q6ZXV5 915 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 FBXO11Q86XK2 927 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 AGBL1Q96MI9 1066 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 MMP19Q99542 508 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 AMNQ9BXJ7 453 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
LINC00996-202ENST00000486954 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 JMJD4Q9H9V9 463 aa13.54□□□□□ -0.24
LINC00996-202ENST00000486954 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 SLC15A5A6NIM6 579 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 CPLX1O14810 134 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 PTPREP23469 700 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 CTGFP29279 349 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 EVCP57679 992 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 USH1GQ495M9 461 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
LINC00996-202ENST00000486954 NOL8Q76FK4 1167 aaKnown RBP13.53□□□□□ -0.24
LINC00996-202ENST00000486954 ABRAQ8N0Z2 381 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 ZNF274Q96GC6 653 aaPredicted RBP13.53□□□□□ -0.24
LINC00996-202ENST00000486954 TRERF1Q96PN7 1200 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 APBA2Q99767 749 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
LINC00996-202ENST00000486954 ZNF536O15090 1300 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 ABCB11O95342 1321 aa13.53□□□□□ -0.24
LINC00996-202ENST00000486954 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
LINC00996-202ENST00000486954 FLT3LGP49771 235 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
LINC00996-202ENST00000486954 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 STK3Q13188 491 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 GRB14Q14449 540 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 DPP9Q86TI2 863 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 ANKRD35Q8N283 1001 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.25
LINC00996-202ENST00000486954 PIBF1Q8WXW3 757 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 DDX11Q96FC9 970 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 PIGSQ96S52 555 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 RBM27Q9P2N5 1060 aaKnown RBP13.52□□□□□ -0.25
LINC00996-202ENST00000486954 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 MRPL11Q9Y3B7 192 aaKnown RBP13.52□□□□□ -0.25
LINC00996-202ENST00000486954 PFASO15067 1338 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 CNTNAP5Q8WYK1 1306 aa13.52□□□□□ -0.25
LINC00996-202ENST00000486954 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
LINC00996-202ENST00000486954 CYTH3O43739 400 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms