RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 KCTD2Q14681 263 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 ZNF792Q3KQV3 632 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 ATF7IPQ6VMQ6 1270 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 RNF135Q8IUD6 432 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 MSL3Q8N5Y2 521 aaKnown RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 ARHGAP45Q92619 1136 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 FRAT1Q92837 279 aaPredicted RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 SEZ6LQ9BYH1 1024 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 TANGO6Q9C0B7 1094 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 SRCIN1Q9C0H9 1055 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 ZHX1Q9UKY1 873 aaPredicted RBP10.25□□□□□ -0.77
APTX-228ENST00000486724 MTUS1Q9ULD2 1270 aa10.25□□□□□ -0.77
APTX-228ENST00000486724 SIP14410 1827 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 ATRXP46100 2492 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 LCHNA4D1U4 455 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 H0Y858 1186 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 SLC25A27O95847 323 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 MS4A1P11836 297 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 RAB3GAP1Q15042 981 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 DGLUCYQ7Z3D6 616 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 DEFB128Q7Z7B8 93 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 ACER1Q8TDN7 264 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 SH3RF3Q8TEJ3 882 aaPredicted RBP10.24□□□□□ -0.77
APTX-228ENST00000486724 COL26A1Q96A83 441 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 PABPC5Q96DU9 382 aaKnown RBP10.24□□□□□ -0.77
APTX-228ENST00000486724 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
APTX-228ENST00000486724 TRPV6Q9H1D0 765 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 TLR9Q9NR96 1032 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 NOB1Q9ULX3 412 aaKnown RBP10.24□□□□□ -0.77
APTX-228ENST00000486724 PTPRCP08575 1304 aa10.24□□□□□ -0.77
APTX-228ENST00000486724 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 CDK5RAP2Q96SN8 1893 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 B4GALT4O60513 344 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 CABYRO75952 493 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 HLA-DOAP06340 250 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 TRIM27P14373 513 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 RFC2P35250 354 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 NBL1P41271 181 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 NUBP1P53384 320 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 VCPP55072 806 aaKnown RBP10.23□□□□□ -0.77
APTX-228ENST00000486724 ITGA7Q13683 1181 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 CCDC102BQ68D86 513 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 NSUN4Q96CB9 384 aaKnown RBP10.23□□□□□ -0.77
APTX-228ENST00000486724 TGS1Q96RS0 853 aaKnown RBP10.23□□□□□ -0.77
APTX-228ENST00000486724 SIL1Q9H173 461 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 FRYLO94915 3013 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 FLT1P17948 1338 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 TPRP12270 2363 aaKnown RBP10.23□□□□□ -0.77
APTX-228ENST00000486724 ACACBO00763 2458 aa10.23□□□□□ -0.77
APTX-228ENST00000486724 ADCY6O43306 1168 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 KDM4AO75164 1064 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 BAIAP3O94812 1187 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 KCNJ6P48051 423 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 ERVK-21P61565 698 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 TIGD5Q53EQ6 642 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 SLC4A10Q6U841 1118 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 EP400NLQ6ZTU2 488 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 ATG9AQ7Z3C6 839 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 MAPKAPK5Q8IW41 473 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 ADSSL1Q8N142 457 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 CRBNQ96SW2 442 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 API5Q9BZZ5 524 aaKnown RBP10.22□□□□□ -0.77
APTX-228ENST00000486724 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 PALD1Q9ULE6 856 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 SCN5AQ14524 2016 aa10.22□□□□□ -0.77
APTX-228ENST00000486724 TANC1Q9C0D5 1861 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 PTPRSQ13332 1948 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 SNAI1O95863 264 aaPredicted RBP10.21□□□□□ -0.77
APTX-228ENST00000486724 RLBP1P12271 317 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 PLCG2P16885 1265 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 AVPR2P30518 371 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 DSG3P32926 999 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 NKX3-2P78367 333 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 ACVR2BQ13705 512 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 COL19A1Q14993 1142 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 SMAD2Q15796 467 aaKnown RBP10.21□□□□□ -0.77
APTX-228ENST00000486724 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 FTSJ3Q8IY81 847 aaKnown RBP10.21□□□□□ -0.77
APTX-228ENST00000486724 TGFBRAP1Q8WUH2 860 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 NKD2Q969F2 451 aaPredicted RBP10.21□□□□□ -0.77
APTX-228ENST00000486724 MRPL38Q96DV4 380 aaKnown RBP10.21□□□□□ -0.77
APTX-228ENST00000486724 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 TNNQ9UQP3 1299 aa10.21□□□□□ -0.77
APTX-228ENST00000486724 TNKSO95271 1327 aa10.21□□□□□ -0.78
APTX-228ENST00000486724 CTAGE5O15320 804 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 GRIN2DO15399 1336 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 FLOT1O75955 427 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 BAG3O95817 575 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 ADORA1P30542 326 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 ZXDAP98168 799 aa10.2□□□□□ -0.78
APTX-228ENST00000486724 COL9A2Q14055 689 aaPredicted RBP10.2□□□□□ -0.78
APTX-228ENST00000486724 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
APTX-228ENST00000486724 TMEM132BQ14DG7 1078 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms