RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 PLS1Q14651 629 aa21.68■■□□□ 1.06
PCOLCE-207ENST00000486440 CMTR1Q8N1G2 835 aaKnown RBP21.68■■□□□ 1.06
PCOLCE-207ENST00000486440 VAT1LQ9HCJ6 419 aa21.68■■□□□ 1.06
PCOLCE-207ENST00000486440 NID2Q14112 1375 aa21.68■■□□□ 1.06
PCOLCE-207ENST00000486440 CENPFP49454 3210 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 ZNF236Q9UL36 1845 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 ERCC3P19447 782 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 RCAN1P53805 252 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 FUT2Q10981 343 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 CCDC174Q6PII3 467 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 SHCBP1Q8NEM2 672 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 CTCFLQ8NI51 663 aaPredicted RBP21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 TEX13BQ9BXU2 312 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 GJD2Q9UKL4 321 aa21.67■■□□□ 1.06
PCOLCE-207ENST00000486440 RBBP6Q7Z6E9 1792 aaKnown RBP21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 SMARCA1P28370 1054 aa21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 KIF5BP33176 963 aa21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 SNRNP48Q6IEG0 339 aaKnown RBP21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 TMTC3Q6ZXV5 915 aa21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 OTOP1Q7RTM1 612 aa21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 TPCN1Q9ULQ1 816 aa21.66■■□□□ 1.06
PCOLCE-207ENST00000486440 GOLGA8BA8MQT2 603 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 PPP1R11O60927 126 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 FMNL1O95466 1100 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 ICAM1P05362 532 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 MAPK4P31152 587 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 ADD1P35611 737 aaKnown RBP21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 FCGRTP55899 365 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 CCNA1P78396 465 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 KIF22Q14807 665 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 CDC37Q16543 378 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 RTN1Q16799 776 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 GPR142Q7Z601 462 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 ZNF274Q96GC6 653 aaPredicted RBP21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 GABRQQ9UN88 632 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 MCM3APO60318 1980 aa21.65■■□□□ 1.06
PCOLCE-207ENST00000486440 GOLGA8AA7E2F4 631 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 SLC25A27O95847 323 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 GNAQP50148 359 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 QRICH1Q2TAL8 776 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 NCAPG2Q86XI2 1143 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 PIGSQ96S52 555 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 LZTS2Q9BRK4 669 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 MROH8Q9H579 483 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 NAP1L2Q9ULW6 460 aaPredicted RBP21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 TRIM17Q9Y577 477 aa21.64■■□□□ 1.05
PCOLCE-207ENST00000486440 TNPO2O14787 897 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 PTPREP23469 700 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 SLC4A3P48751 1232 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 NTRK3Q16288 839 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 MORN1Q5T089 497 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 PLEKHH3Q7Z736 793 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 CCDC82Q8N4S0 544 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 USP6NLQ92738 828 aa21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 NCOA5Q9HCD5 579 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 RBM28Q9NW13 759 aaKnown RBP21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 CTDP1Q9Y5B0 961 aaPredicted RBP21.63■■□□□ 1.05
PCOLCE-207ENST00000486440 LARGE1O95461 756 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 GNRH1P01148 92 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 METAP2P50579 478 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 CCT2P78371 535 aaKnown RBP21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 RABEP1Q15276 862 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 MUM1L1Q5H9M0 696 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 SRRDQ9UH36 339 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 CCPG1Q9ULG6 757 aa21.62■■□□□ 1.05
PCOLCE-207ENST00000486440 CNTNAP5Q8WYK1 1306 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 ZBTB5O15062 677 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 DHX16O60231 1041 aaKnown RBP21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 ALAS1P13196 640 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 PRKCZQ05513 592 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 PPP2R5BQ15173 497 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 ME3Q16798 604 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 CLEC4DQ8WXI8 215 aa21.61■■□□□ 1.05
PCOLCE-207ENST00000486440 hCG_1642624A0A1W2PR95 340 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 PFKFB2O60825 505 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 FLT3LGP49771 235 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 STK3Q13188 491 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 GRB14Q14449 540 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 ANKRD1Q15327 319 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 WDR78Q5VTH9 848 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 HOMER1Q86YM7 354 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 CCAR1Q8IX12 1150 aaKnown RBP21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 PIBF1Q8WXW3 757 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 COA7Q96BR5 231 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 TRERF1Q96PN7 1200 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 HOMER2Q9NSB8 354 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 RNF146Q9NTX7 359 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 PTPN22Q9Y2R2 807 aa21.6■■□□□ 1.05
PCOLCE-207ENST00000486440 PNMA6FA0A0J9YX94 578 aa21.59■■□□□ 1.05
PCOLCE-207ENST00000486440 SLC15A5A6NIM6 579 aa21.59■■□□□ 1.05
PCOLCE-207ENST00000486440 STRNO43815 780 aa21.59■■□□□ 1.05
PCOLCE-207ENST00000486440 COBLO75128 1261 aa21.59■■□□□ 1.05
PCOLCE-207ENST00000486440 CD2BP2O95400 341 aaKnown RBP21.59■■□□□ 1.05
PCOLCE-207ENST00000486440 COPB2P35606 906 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms