RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 DNAJC25-GNG10A0A024R161 153 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 H0YGN5 161 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 SEPT4O43236 478 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 SLC16A2P36021 539 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 SNAP25P60880 206 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 PTH1RQ03431 593 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 ZNF543Q08ER8 600 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 ZSCAN10Q96SZ4 725 aaPredicted RBP21.5■■□□□ 1.03
CLDN11-206ENST00000486429 UBAC1Q9BSL1 405 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 RANBP17Q9H2T7 1088 aaKnown RBP21.5■■□□□ 1.03
CLDN11-206ENST00000486429 KAT14Q9H8E8 782 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 CCPG1Q9ULG6 757 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 NR2E3Q9Y5X4 410 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 TNKSO95271 1327 aa21.5■■□□□ 1.03
CLDN11-206ENST00000486429 SNHG28P0DPA3 235 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 ALAS1P13196 640 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 PRAMEF19Q5SWL8 479 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 MSL3Q8N5Y2 521 aaKnown RBP21.49■■□□□ 1.03
CLDN11-206ENST00000486429 ENAHQ8N8S7 591 aaPredicted RBP21.49■■□□□ 1.03
CLDN11-206ENST00000486429 PNMA1Q8ND90 353 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 ZSWIM5Q9P217 1185 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
CLDN11-206ENST00000486429 EVI5O60447 810 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 CYP21A2P08686 494 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 TRDNQ13061 729 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 GPATCH4Q5T3I0 446 aaKnown RBP21.48■■□□□ 1.03
CLDN11-206ENST00000486429 ZNF467Q7Z7K2 595 aaPredicted RBP21.48■■□□□ 1.03
CLDN11-206ENST00000486429 TRERF1Q96PN7 1200 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 PFASO15067 1338 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 SYNGAP1Q96PV0 1343 aa21.48■■□□□ 1.03
CLDN11-206ENST00000486429 ICAM1P05362 532 aa21.47■■□□□ 1.03
CLDN11-206ENST00000486429 COL6A1P12109 1028 aa21.47■■□□□ 1.03
CLDN11-206ENST00000486429 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
CLDN11-206ENST00000486429 ANO1Q5XXA6 986 aa21.47■■□□□ 1.03
CLDN11-206ENST00000486429 ANKS1AQ92625 1134 aa21.47■■□□□ 1.03
CLDN11-206ENST00000486429 A1CFQ9NQ94 594 aaKnown RBP21.47■■□□□ 1.03
CLDN11-206ENST00000486429 POTEB2H3BUK9 544 aa21.46■■□□□ 1.03
CLDN11-206ENST00000486429 DNM1LO00429 736 aa21.46■■□□□ 1.03
CLDN11-206ENST00000486429 SKAP1Q86WV1 359 aa21.46■■□□□ 1.03
CLDN11-206ENST00000486429 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
CLDN11-206ENST00000486429 GOLGA8HP0CJ92 632 aa21.45■■□□□ 1.02
CLDN11-206ENST00000486429 IFIT1BQ5T764 474 aaKnown RBP21.45■■□□□ 1.02
CLDN11-206ENST00000486429 MAMDC4Q6UXC1 1216 aa21.45■■□□□ 1.02
CLDN11-206ENST00000486429 KIAA1211Q6ZU35 1233 aa21.45■■□□□ 1.02
CLDN11-206ENST00000486429 RALYLQ86SE5 291 aaKnown RBP21.45■■□□□ 1.02
CLDN11-206ENST00000486429 FGD4Q96M96 766 aa21.45■■□□□ 1.02
CLDN11-206ENST00000486429 PNMA2Q9UL42 364 aa21.45■■□□□ 1.02
CLDN11-206ENST00000486429 NEFLP07196 543 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 ZNF865P0CJ78 1059 aaPredicted RBP21.44■■□□□ 1.02
CLDN11-206ENST00000486429 RARBP10826 455 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 AKR1A1P14550 325 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 TAL1P17542 331 aaPredicted RBP21.44■■□□□ 1.02
CLDN11-206ENST00000486429 ASPRV1Q53RT3 343 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 MUM1L1Q5H9M0 696 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 CYB5R4Q7L1T6 521 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 C7orf61Q8IZ16 206 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 FAM133AQ8N9E0 248 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 ARRDC4Q8NCT1 418 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 MAP4K1Q92918 833 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 ESYT1Q9BSJ8 1104 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 ZHX1Q9UKY1 873 aaPredicted RBP21.44■■□□□ 1.02
CLDN11-206ENST00000486429 RBM8AQ9Y5S9 174 aaKnown RBP21.44■■□□□ 1.02
CLDN11-206ENST00000486429 WDR19Q8NEZ3 1342 aa21.44■■□□□ 1.02
CLDN11-206ENST00000486429 KBTBD13C9JR72 458 aa21.43■■□□□ 1.02
CLDN11-206ENST00000486429 MYCNP04198 464 aaPredicted RBP21.43■■□□□ 1.02
CLDN11-206ENST00000486429 CNTN2Q02246 1040 aa21.43■■□□□ 1.02
CLDN11-206ENST00000486429 GJC2Q5T442 439 aaPredicted RBP21.43■■□□□ 1.02
CLDN11-206ENST00000486429 NSMFQ6X4W1 530 aa21.43■■□□□ 1.02
CLDN11-206ENST00000486429 XPNPEP3Q9NQH7 507 aa21.43■■□□□ 1.02
CLDN11-206ENST00000486429 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.43■■□□□ 1.02
CLDN11-206ENST00000486429 TAF6LQ9Y6J9 622 aa21.43■■□□□ 1.02
CLDN11-206ENST00000486429 LRRC37A2A6NM11 1700 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 E7EWF7 191 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 SNAI1O95863 264 aaPredicted RBP21.42■■□□□ 1.02
CLDN11-206ENST00000486429 SEC23AQ15436 765 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 ARMCX2Q7L311 632 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 NCOA7Q8NI08 942 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 CYP39A1Q9NYL5 469 aa21.42■■□□□ 1.02
CLDN11-206ENST00000486429 PARP1P09874 1014 aaKnown RBP21.41■■□□□ 1.02
CLDN11-206ENST00000486429 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
CLDN11-206ENST00000486429 CCDC144CPQ8IYA2 1237 aa21.41■■□□□ 1.02
CLDN11-206ENST00000486429 SENP6Q9GZR1 1112 aaPredicted RBP21.41■■□□□ 1.02
CLDN11-206ENST00000486429 UBA5Q9GZZ9 404 aa21.41■■□□□ 1.02
CLDN11-206ENST00000486429 LSG1Q9H089 658 aaKnown RBP21.41■■□□□ 1.02
CLDN11-206ENST00000486429 CPVLQ9H3G5 476 aa21.41■■□□□ 1.02
CLDN11-206ENST00000486429 MCM3APO60318 1980 aa21.41■■□□□ 1.02
CLDN11-206ENST00000486429 ERICH2A1L162 156 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 NFIBO00712 420 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 ACVR2BQ13705 512 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 SART3Q15020 963 aaKnown RBP21.4■■□□□ 1.02
CLDN11-206ENST00000486429 LRRC41Q15345 812 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 CHRDL2Q6WN34 429 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 LENG1Q96BZ8 264 aaPredicted RBP21.4■■□□□ 1.02
CLDN11-206ENST00000486429 ABHD16BQ9H3Z7 469 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 ANO2Q9NQ90 1003 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 FAM184BQ9ULE4 1060 aa21.4■■□□□ 1.02
CLDN11-206ENST00000486429 COLQQ9Y215 455 aaPredicted RBP21.4■■□□□ 1.02
CLDN11-206ENST00000486429 LCTP09848 1927 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms