RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 NOL8Q76FK4 1167 aaKnown RBP16.26■□□□□ 0.19
SCAF4-206ENST00000485790 Q7L0L9 218 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 TRERF1Q96PN7 1200 aa16.26■□□□□ 0.19
SCAF4-206ENST00000485790 ELP1O95163 1332 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 ORC4O43929 436 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
SCAF4-206ENST00000485790 C6orf222P0C671 652 aaPredicted RBP16.25■□□□□ 0.19
SCAF4-206ENST00000485790 SHHQ15465 462 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 CCDC144BQ3MJ40 725 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 INCENPQ9NQS7 918 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 IL17RBQ9NRM6 502 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 PNMA2Q9UL42 364 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
SCAF4-206ENST00000485790 PLIN4Q96Q06 1357 aa16.25■□□□□ 0.19
SCAF4-206ENST00000485790 DNAH12Q6ZR08 3092 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 KIAA0355O15063 1070 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 ADAMTS4O75173 837 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 FGAP02671 866 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 ALAS1P13196 640 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
SCAF4-206ENST00000485790 CCDC174Q6PII3 467 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 KCTD1Q719H9 257 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 ARMCX2Q7L311 632 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 ANKRD33Q7Z3H0 272 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 SH3RF1Q7Z6J0 888 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 CCDC144CPQ8IYA2 1237 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 TRIM43Q96BQ3 446 aaPredicted RBP16.24■□□□□ 0.19
SCAF4-206ENST00000485790 RNF146Q9NTX7 359 aa16.24■□□□□ 0.19
SCAF4-206ENST00000485790 MROH7Q68CQ1 1323 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 SYNRGQ9UMZ2 1314 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 ZEB2O60315 1214 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 FGRP09769 529 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
SCAF4-206ENST00000485790 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
SCAF4-206ENST00000485790 GJA9P57773 515 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 TNFAIP2Q03169 654 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 CCDC96Q2M329 555 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 FAM133AQ8N9E0 248 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 TTC14Q96N46 770 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 AP5M1Q9H0R1 490 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 TCP11L1Q9NUJ3 509 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 PRR12Q9ULL5 1215 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 MTMR7Q9Y216 660 aa16.23■□□□□ 0.19
SCAF4-206ENST00000485790 SALL3Q9BXA9 1300 aa16.22■□□□□ 0.19
SCAF4-206ENST00000485790 NMT2O60551 498 aa16.22■□□□□ 0.19
SCAF4-206ENST00000485790 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
SCAF4-206ENST00000485790 CNTN2Q02246 1040 aa16.22■□□□□ 0.19
SCAF4-206ENST00000485790 IQSEC1Q6DN90 963 aa16.22■□□□□ 0.19
SCAF4-206ENST00000485790 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
SCAF4-206ENST00000485790 A1CFQ9NQ94 594 aaKnown RBP16.22■□□□□ 0.19
SCAF4-206ENST00000485790 ADD3Q9UEY8 706 aaKnown RBP16.22■□□□□ 0.19
SCAF4-206ENST00000485790 CCPG1Q9ULG6 757 aa16.22■□□□□ 0.19
SCAF4-206ENST00000485790 DLL1O00548 723 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 TLR3O15455 904 aaKnown RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 CABYRO75952 493 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 ICAM1P05362 532 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 ASGR1P07306 291 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 NOVP48745 357 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 SMAD3P84022 425 aaKnown RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 FPGSQ05932 587 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 FAAP100Q0VG06 881 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 LENG1Q96BZ8 264 aaPredicted RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 FAM227BQ96M60 508 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
SCAF4-206ENST00000485790 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 LNPKQ9C0E8 428 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 ZNF236Q9UL36 1845 aa16.21■□□□□ 0.19
SCAF4-206ENST00000485790 ZNF536O15090 1300 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
SCAF4-206ENST00000485790 A0A0U1RQG5 324 aaPredicted RBP16.2■□□□□ 0.18
SCAF4-206ENST00000485790 ARVCFO00192 962 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 ZNF213O14771 459 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 FOXP2O15409 715 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 TIMP1P01033 207 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 NT5C2P49902 561 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 CCDC178Q5BJE1 867 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 NSMFQ6X4W1 530 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 TMEM47Q9BQJ4 181 aa16.2■□□□□ 0.18
SCAF4-206ENST00000485790 UPF3AQ9H1J1 476 aaKnown RBP16.2■□□□□ 0.18
SCAF4-206ENST00000485790 SOWAHBA6NEL2 793 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 B4DLN1 442 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 HIP1O00291 1037 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 DYNC1LI2O43237 492 aaPredicted RBP16.19■□□□□ 0.18
SCAF4-206ENST00000485790 CDK7P50613 346 aa16.19■□□□□ 0.18
SCAF4-206ENST00000485790 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms