RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 Q7L0L9 218 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 FAM227BQ96M60 508 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 YTHDC1Q96MU7 727 aaKnown RBP20.29■□□□□ 0.84
SMC4-216ENST00000485645 TSEN34Q9BSV6 310 aaKnown RBP20.29■□□□□ 0.84
SMC4-216ENST00000485645 LNPKQ9C0E8 428 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 ABHD16BQ9H3Z7 469 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 TACC3Q9Y6A5 838 aa20.29■□□□□ 0.84
SMC4-216ENST00000485645 LTBP2Q14767 1821 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 A0A0D9SFI3 127 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 DUSP11O75319 330 aaKnown RBP20.28■□□□□ 0.84
SMC4-216ENST00000485645 FGAP02671 866 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 FGRP09769 529 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 TKFCQ3LXA3 575 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 BADQ92934 168 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 AGBL1Q96MI9 1066 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
SMC4-216ENST00000485645 TOMM22Q9NS69 142 aa20.28■□□□□ 0.84
SMC4-216ENST00000485645 ZNF536O15090 1300 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 SYNRGQ9UMZ2 1314 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 TRIM43BA6NCK2 446 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 ACLYP53396 1101 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 ARMCX2Q7L311 632 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 SH3RF1Q7Z6J0 888 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 KLHDC9Q8NEP7 349 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 NUP133Q8WUM0 1156 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 TRIM43Q96BQ3 446 aaPredicted RBP20.27■□□□□ 0.84
SMC4-216ENST00000485645 FGD4Q96M96 766 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 RNF146Q9NTX7 359 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 MTMR7Q9Y216 660 aa20.27■□□□□ 0.84
SMC4-216ENST00000485645 MCM3APO60318 1980 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 MOXD2PA6NHM9 499 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 CLTBP09497 229 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 HSPD1P10809 573 aaKnown RBP20.26■□□□□ 0.83
SMC4-216ENST00000485645 ALAS1P13196 640 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 NOVP48745 357 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 CNTN2Q02246 1040 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 NMIQ13287 307 aaPredicted RBP20.26■□□□□ 0.83
SMC4-216ENST00000485645 KCNA10Q16322 511 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 RRP12Q5JTH9 1297 aaKnown RBP20.26■□□□□ 0.83
SMC4-216ENST00000485645 CCDC174Q6PII3 467 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 CCDC144CPQ8IYA2 1237 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 TRERF1Q96PN7 1200 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 SPC25Q9HBM1 224 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 A1CFQ9NQ94 594 aaKnown RBP20.26■□□□□ 0.83
SMC4-216ENST00000485645 STARD7Q9NQZ5 370 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 PRR12Q9ULL5 1215 aa20.26■□□□□ 0.83
SMC4-216ENST00000485645 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
SMC4-216ENST00000485645 CCDC96Q2M329 555 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 CCDC144BQ3MJ40 725 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
SMC4-216ENST00000485645 SMC5Q8IY18 1101 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 DCAF4Q8WV16 495 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 MTMR10Q9NXD2 777 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 ZMYM6O95789 1325 aa20.25■□□□□ 0.83
SMC4-216ENST00000485645 C6orf222P0C671 652 aaPredicted RBP20.24■□□□□ 0.83
SMC4-216ENST00000485645 CST5P28325 142 aaPredicted RBP20.24■□□□□ 0.83
SMC4-216ENST00000485645 SNAP25P60880 206 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 SHHQ15465 462 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 CCSAPQ6IQ19 270 aaPredicted RBP20.24■□□□□ 0.83
SMC4-216ENST00000485645 RASGRP2Q7LDG7 609 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 PCSK9Q8NBP7 692 aaKnown RBP20.24■□□□□ 0.83
SMC4-216ENST00000485645 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 COL6A3P12111 3177 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 CCDC171Q6TFL3 1326 aa20.24■□□□□ 0.83
SMC4-216ENST00000485645 MYADML2A6NDP7 307 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 ASB14A6NK59 587 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 DCDC2CA8MYV0 355 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
SMC4-216ENST00000485645 MFAP1P55081 439 aaKnown RBP20.23■□□□□ 0.83
SMC4-216ENST00000485645 GJA9P57773 515 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 GLT1D1Q96MS3 346 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 TOX2Q96NM4 488 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 TCP11L1Q9NUJ3 509 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 TMEM39AQ9NV64 488 aa20.23■□□□□ 0.83
SMC4-216ENST00000485645 SOWAHBA6NEL2 793 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 KIAA0355O15063 1070 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 ADCY6O43306 1168 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 RAG1P15918 1043 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 HAND2P61296 217 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 IRX5P78411 483 aaPredicted RBP20.22■□□□□ 0.83
SMC4-216ENST00000485645 C9orf50Q5SZB4 431 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 FAM109BQ6ICB4 259 aaPredicted RBP20.22■□□□□ 0.83
SMC4-216ENST00000485645 ANKRD33Q7Z3H0 272 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 KATNBL1Q9H079 304 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 UPF3AQ9H1J1 476 aaKnown RBP20.22■□□□□ 0.83
SMC4-216ENST00000485645 CCPG1Q9ULG6 757 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 STXBP5LQ9Y2K9 1186 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 ELP1O95163 1332 aa20.22■□□□□ 0.83
SMC4-216ENST00000485645 ICAM1P05362 532 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 ASGR1P07306 291 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
SMC4-216ENST00000485645 SDSP20132 328 aa20.21■□□□□ 0.83
SMC4-216ENST00000485645 ITGB8P26012 769 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms