RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 PICK1Q9NRD5 415 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 PCDHA4Q9UN74 947 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 CLIC4Q9Y696 253 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 GREB1LQ9C091 1923 aaPredicted RBP10.93□□□□□ -0.66
CTSA-208ENST00000485627 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
CTSA-208ENST00000485627 CCDC194A0A1B0GVG4 234 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 A0A1W2PRG0 241 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 SMCO2A6NFE2 343 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 ZBTB5O15062 677 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 BMP15O95972 392 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 ECE1P42892 770 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
CTSA-208ENST00000485627 TRAF1Q13077 416 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 ZYXQ15942 572 aaKnown RBP10.92□□□□□ -0.66
CTSA-208ENST00000485627 SLC35G1Q2M3R5 365 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 SYDE2Q5VT97 1194 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 PRAMEF18Q5VWM3 479 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 LINC00301Q8NCQ3 95 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 ACER1Q8TDN7 264 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 WRNIP1Q96S55 665 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 FTOQ9C0B1 505 aaKnown RBP eCLIP10.92□□□□□ -0.66
CTSA-208ENST00000485627 JMJD4Q9H9V9 463 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 AS3MTQ9HBK9 375 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 SCN4AP35499 1836 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 MYH6P13533 1939 aa10.92□□□□□ -0.66
CTSA-208ENST00000485627 TRIM75PA6NK02 468 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 LETM1O95202 739 aaPredicted RBP10.91□□□□□ -0.66
CTSA-208ENST00000485627 NF2P35240 595 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 TRAPPC10P48553 1259 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 STAT2P52630 851 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 SLC39A14Q15043 492 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 CST9Q5W186 159 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 CCDC73Q6ZRK6 1079 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 PIK3AP1Q6ZUJ8 805 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 KRT26Q7Z3Y9 468 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 FAM160B2Q86V87 743 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 SCYL3Q8IZE3 742 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 ZC3H15Q8WU90 426 aaKnown RBP10.91□□□□□ -0.66
CTSA-208ENST00000485627 NUP88Q99567 741 aaPredicted RBP10.91□□□□□ -0.66
CTSA-208ENST00000485627 ZMYND12Q9H0C1 365 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 GLT8D2Q9H1C3 349 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 ZNF112Q9UJU3 913 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 MYH4Q9Y623 1939 aa10.91□□□□□ -0.66
CTSA-208ENST00000485627 PDE4DIPQ5VU43 2346 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 ESYT2A0FGR8 921 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 PPP1R12BO60237 982 aaPredicted RBP10.9□□□□□ -0.66
CTSA-208ENST00000485627 PPP6R2O75170 966 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 INPP5BP32019 993 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 ADCY7P51828 1080 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 USP14P54578 494 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
CTSA-208ENST00000485627 FAM83BQ5T0W9 1011 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 KRT25Q7Z3Z0 450 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.66
CTSA-208ENST00000485627 LPAR1Q92633 364 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 COA7Q96BR5 231 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 SHISA4Q96DD7 197 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 FEM1BQ9UK73 627 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 CASP8AP2Q9UKL3 1982 aa10.9□□□□□ -0.66
CTSA-208ENST00000485627 TCHHQ07283 1943 aa10.9□□□□□ -0.67
CTSA-208ENST00000485627 BAZ2BQ9UIF8 2168 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 MARCKSP29966 332 aaPredicted RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 IREB2P48200 963 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 MRPL12P52815 198 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 SOX10P56693 466 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 DGKZQ13574 1117 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 PRKG1Q13976 671 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 NPY5RQ15761 445 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 QRICH1Q2TAL8 776 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 TTC38Q5R3I4 469 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 ADALQ6DHV7 355 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 PNMA8AQ86V59 439 aaPredicted RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 FBXO11Q86XK2 927 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 REXO1Q8N1G1 1221 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 CUL5Q93034 780 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 TNFRSF25Q93038 417 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 PGBD1Q96JS3 809 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 BEGAINQ9BUH8 593 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 AMNQ9BXJ7 453 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
CTSA-208ENST00000485627 DDX19AQ9NUU7 478 aaKnown RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.89□□□□□ -0.67
CTSA-208ENST00000485627 PCDHA7Q9UN72 937 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms