RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 MKL1Q969V6 931 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 TIFAQ96CG3 184 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
SMARCD3-211ENST00000485592 EYSQ5T1H1 3165 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 PRDM1O75626 825 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 FDX1P10109 184 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 GJA9P57773 515 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 GRIN2CQ14957 1233 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 ZNF576Q9H609 170 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
SMARCD3-211ENST00000485592 ARVCFO00192 962 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 BMP3P12645 472 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 CDK7P50613 346 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 PDE4BQ07343 736 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 SLFN13Q68D06 897 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 PSRC1Q6PGN9 363 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 GAS2L1Q99501 681 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 PLIN4Q96Q06 1357 aa16.36■□□□□ 0.21
SMARCD3-211ENST00000485592 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 ADCY6O43306 1168 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 STAT2P52630 851 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 IRX5P78411 483 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 FAM126BQ8IXS8 530 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 FGD4Q96M96 766 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
SMARCD3-211ENST00000485592 TMEM232C9JQI7 657 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 M0R2C6 588 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 CSF2RAP15509 400 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 TSHZ3Q63HK5 1081 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 NOL8Q76FK4 1167 aaKnown RBP16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 NEDD1Q8NHV4 660 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
SMARCD3-211ENST00000485592 ASB14A6NK59 587 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 SLC1A4P43007 532 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 CNTN2Q02246 1040 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 TNFAIP2Q03169 654 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 TJAP1Q5JTD0 557 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 PBX4Q9BYU1 374 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 NAPBQ9H115 298 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 RNF146Q9NTX7 359 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.2
SMARCD3-211ENST00000485592 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 ZEB2O60315 1214 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 CABYRO75952 493 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 ACRP10323 421 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 NKX3-2P78367 333 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 BEX3Q00994 111 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 TFAP4Q01664 338 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 FAM133AQ8N9E0 248 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 USP38Q8NB14 1042 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 KATNBL1Q9H079 304 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 PRDM6Q9NQX0 595 aa16.32■□□□□ 0.2
SMARCD3-211ENST00000485592 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 ERC2O15083 957 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 CD4P01730 458 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 PBX2P40425 430 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 PPARAQ07869 468 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 RAB30Q15771 203 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 RASIP1Q5U651 963 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 C16orf59Q7L2K0 433 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 TRERF1Q96PN7 1200 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 HIPK3Q9H422 1215 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 IL23AQ9NPF7 189 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 MSRAQ9UJ68 235 aa16.31■□□□□ 0.2
SMARCD3-211ENST00000485592 ZNF536O15090 1300 aa16.3■□□□□ 0.2
SMARCD3-211ENST00000485592 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms