RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 B4GALNT3Q6L9W6 998 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 KCTD1Q719H9 257 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 ACAD9Q9H845 621 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 PRDM5Q9NQX1 630 aaPredicted RBP30.4■■■□□ 2.46
HLA-F-227ENST00000485513 TOMM22Q9NS69 142 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 MCM3APO60318 1980 aa30.4■■■□□ 2.46
HLA-F-227ENST00000485513 RILPL2Q969X0 211 aa30.39■■■□□ 2.46
HLA-F-227ENST00000485513 FGD4Q96M96 766 aa30.39■■■□□ 2.46
HLA-F-227ENST00000485513 AGBL1Q96MI9 1066 aa30.39■■■□□ 2.46
HLA-F-227ENST00000485513 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.39■■■□□ 2.46
HLA-F-227ENST00000485513 ADAMTS4O75173 837 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 HSPD1P10809 573 aaKnown RBP30.38■■■□□ 2.45
HLA-F-227ENST00000485513 NOVP48745 357 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 ACVR2BQ13705 512 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 ZNF589Q86UQ0 364 aaPredicted RBP30.38■■■□□ 2.45
HLA-F-227ENST00000485513 RNF146Q9NTX7 359 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 MTMR7Q9Y216 660 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 ZNF536O15090 1300 aa30.38■■■□□ 2.45
HLA-F-227ENST00000485513 TKFCQ3LXA3 575 aa30.37■■■□□ 2.45
HLA-F-227ENST00000485513 RRP12Q5JTH9 1297 aaKnown RBP30.37■■■□□ 2.45
HLA-F-227ENST00000485513 TSEN34Q9BSV6 310 aaKnown RBP30.37■■■□□ 2.45
HLA-F-227ENST00000485513 ABHD16BQ9H3Z7 469 aa30.37■■■□□ 2.45
HLA-F-227ENST00000485513 PDLIM7Q9NR12 457 aa30.37■■■□□ 2.45
HLA-F-227ENST00000485513 ZMYM6O95789 1325 aa30.37■■■□□ 2.45
HLA-F-227ENST00000485513 SYNRGQ9UMZ2 1314 aa30.37■■■□□ 2.45
HLA-F-227ENST00000485513 A0A1W2PQ45 241 aaPredicted RBP30.36■■■□□ 2.45
HLA-F-227ENST00000485513 A0A1W2PQY0 241 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 TLE2Q04725 743 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 ARMCX2Q7L311 632 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 RASGRP2Q7LDG7 609 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 CHD1LQ86WJ1 897 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 PRR12Q9ULL5 1215 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 CCDC171Q6TFL3 1326 aa30.36■■■□□ 2.45
HLA-F-227ENST00000485513 POTEB2H3BUK9 544 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 DUSP11O75319 330 aaKnown RBP30.35■■■□□ 2.45
HLA-F-227ENST00000485513 CNTN2Q02246 1040 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 CCDC96Q2M329 555 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 CCDC174Q6PII3 467 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 DEFB123Q8N688 67 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 DCAF4Q8WV16 495 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 TRERF1Q96PN7 1200 aa30.35■■■□□ 2.45
HLA-F-227ENST00000485513 A1CFQ9NQ94 594 aaKnown RBP30.35■■■□□ 2.45
HLA-F-227ENST00000485513 IGHDP01880 384 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 ALAS1P13196 640 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 SNAP25P60880 206 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 SH3RF1Q7Z6J0 888 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 CCDC144CPQ8IYA2 1237 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 FAM133AQ8N9E0 248 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 KLHDC9Q8NEP7 349 aa30.34■■■□□ 2.45
HLA-F-227ENST00000485513 TRIM43BA6NCK2 446 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 ACLYP53396 1101 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 HAND2P61296 217 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 NUCB1Q02818 461 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 CCDC144BQ3MJ40 725 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 Q7L0L9 218 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 PLEKHM2Q8IWE5 1019 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 EXOC6Q8TAG9 804 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 BADQ92934 168 aa30.33■■■□□ 2.45
HLA-F-227ENST00000485513 TRIM43Q96BQ3 446 aaPredicted RBP30.33■■■□□ 2.45
HLA-F-227ENST00000485513 TOP1P11387 765 aaKnown RBP30.32■■■□□ 2.44
HLA-F-227ENST00000485513 SDSP20132 328 aa30.32■■■□□ 2.44
HLA-F-227ENST00000485513 MFAP1P55081 439 aaKnown RBP30.32■■■□□ 2.44
HLA-F-227ENST00000485513 KCNA10Q16322 511 aa30.32■■■□□ 2.44
HLA-F-227ENST00000485513 NUP133Q8WUM0 1156 aa30.32■■■□□ 2.44
HLA-F-227ENST00000485513 OSBPL3Q9H4L5 887 aa30.32■■■□□ 2.44
HLA-F-227ENST00000485513 TCP11L1Q9NUJ3 509 aa30.32■■■□□ 2.44
HLA-F-227ENST00000485513 MOXD2PA6NHM9 499 aa30.31■■■□□ 2.44
HLA-F-227ENST00000485513 CLTBP09497 229 aa30.31■■■□□ 2.44
HLA-F-227ENST00000485513 TMEM47Q9BQJ4 181 aa30.31■■■□□ 2.44
HLA-F-227ENST00000485513 SPC25Q9HBM1 224 aa30.31■■■□□ 2.44
HLA-F-227ENST00000485513 STARD7Q9NQZ5 370 aa30.31■■■□□ 2.44
HLA-F-227ENST00000485513 MYADML2A6NDP7 307 aa30.3■■■□□ 2.44
HLA-F-227ENST00000485513 ADCY6O43306 1168 aa30.3■■■□□ 2.44
HLA-F-227ENST00000485513 PQBP1O60828 265 aaKnown RBP30.3■■■□□ 2.44
HLA-F-227ENST00000485513 CST5P28325 142 aaPredicted RBP30.3■■■□□ 2.44
HLA-F-227ENST00000485513 AKNAD1Q5T1N1 836 aa30.3■■■□□ 2.44
HLA-F-227ENST00000485513 CCSAPQ6IQ19 270 aaPredicted RBP30.3■■■□□ 2.44
HLA-F-227ENST00000485513 KATNBL1Q9H079 304 aa30.3■■■□□ 2.44
HLA-F-227ENST00000485513 CCPG1Q9ULG6 757 aa30.3■■■□□ 2.44
HLA-F-227ENST00000485513 SOWAHBA6NEL2 793 aa30.29■■■□□ 2.44
HLA-F-227ENST00000485513 C6orf222P0C671 652 aaPredicted RBP30.29■■■□□ 2.44
HLA-F-227ENST00000485513 PCP11498 1178 aaKnown RBP30.29■■■□□ 2.44
HLA-F-227ENST00000485513 MUM1L1Q5H9M0 696 aa30.29■■■□□ 2.44
HLA-F-227ENST00000485513 TTBK2Q6IQ55 1244 aa30.29■■■□□ 2.44
HLA-F-227ENST00000485513 MFSD6Q6ZSS7 791 aa30.29■■■□□ 2.44
HLA-F-227ENST00000485513 UPF3AQ9H1J1 476 aaKnown RBP30.29■■■□□ 2.44
HLA-F-227ENST00000485513 ASB14A6NK59 587 aa30.28■■■□□ 2.44
HLA-F-227ENST00000485513 ICAM1P05362 532 aa30.28■■■□□ 2.44
HLA-F-227ENST00000485513 SLC16A2P36021 539 aa30.28■■■□□ 2.44
HLA-F-227ENST00000485513 BTNL9Q6UXG8 535 aa30.28■■■□□ 2.44
HLA-F-227ENST00000485513 PCSK9Q8NBP7 692 aaKnown RBP30.28■■■□□ 2.44
HLA-F-227ENST00000485513 RANBP17Q9H2T7 1088 aaKnown RBP30.28■■■□□ 2.44
HLA-F-227ENST00000485513 GJA9P57773 515 aa30.27■■■□□ 2.44
HLA-F-227ENST00000485513 IRX5P78411 483 aaPredicted RBP30.27■■■□□ 2.44
HLA-F-227ENST00000485513 SHHQ15465 462 aa30.27■■■□□ 2.44
HLA-F-227ENST00000485513 SYDE2Q5VT97 1194 aa30.27■■■□□ 2.44
HLA-F-227ENST00000485513 TBC1D10CQ8IV04 446 aa30.27■■■□□ 2.44
HLA-F-227ENST00000485513 RNF41Q9H4P4 317 aaPredicted RBP30.27■■■□□ 2.44
HLA-F-227ENST00000485513 MTMR10Q9NXD2 777 aa30.27■■■□□ 2.44
HLA-F-227ENST00000485513 CYP39A1Q9NYL5 469 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms