RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 TMEM145Q8NBT3 493 aa7.37□□□□□ -1.23
SRRM1-213ENST00000485441 MFSD3Q96ES6 412 aa7.37□□□□□ -1.23
SRRM1-213ENST00000485441 ZDHHC15Q96MV8 337 aa7.37□□□□□ -1.23
SRRM1-213ENST00000485441 DBNDD2Q9BQY9 259 aa7.37□□□□□ -1.23
SRRM1-213ENST00000485441 TRIM39Q9HCM9 518 aa7.37□□□□□ -1.23
SRRM1-213ENST00000485441 GPR55Q9Y2T6 319 aaPredicted RBP7.37□□□□□ -1.23
SRRM1-213ENST00000485441 NOP58Q9Y2X3 529 aaKnown RBP7.37□□□□□ -1.23
SRRM1-213ENST00000485441 WASH4PA8MWX3 477 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 H2AFB1P0C5Y9 115 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 H2AFB2P0C5Z0 115 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 ITIH2P19823 946 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 SDSP20132 328 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 AMPD2Q01433 879 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 GAB4Q2WGN9 574 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 THNSL2Q86YJ6 484 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 KCTD13Q8WZ19 329 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 FCRL3Q96P31 734 aaPredicted RBP7.36□□□□□ -1.23
SRRM1-213ENST00000485441 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
SRRM1-213ENST00000485441 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
SRRM1-213ENST00000485441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-213ENST00000485441 BLACEA4D250 179 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 GNAT3A8MTJ3 354 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 WDR64B1ANS9 1081 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 AURKAO14965 403 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 CPP00450 1065 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 IGLV1-40P01703 118 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 BMP8BP34820 402 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 POU4F1Q01851 419 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 TESK1Q15569 626 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 DPY19L1Q2PZI1 675 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 NKAPLQ5M9Q1 402 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 CRTC3Q6UUV7 619 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 TSPYL5Q86VY4 417 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-213ENST00000485441 SHKBP1Q8TBC3 707 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 ZCRB1Q8TBF4 217 aaKnown RBP7.35□□□□□ -1.23
SRRM1-213ENST00000485441 SLC12A9Q9BXP2 914 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 ASCC2Q9H1I8 757 aaPredicted RBP7.35□□□□□ -1.23
SRRM1-213ENST00000485441 SEMA3GQ9NS98 782 aa7.35□□□□□ -1.23
SRRM1-213ENST00000485441 GSG1L2A8MUP6 293 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 MEIS1O00470 390 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 SNRPB2P08579 225 aaKnown RBP7.34□□□□□ -1.23
SRRM1-213ENST00000485441 VAV1P15498 845 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 GABREP78334 506 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 SCRN1Q12765 414 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 PRSS53Q2L4Q9 553 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 TAF7LQ5H9L4 462 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 RPUSD2Q8IZ73 545 aaKnown RBP7.34□□□□□ -1.23
SRRM1-213ENST00000485441 FAM181AQ8N9Y4 354 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 LINC00116Q8NCU8 138 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 NPLOC4Q8TAT6 608 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 FRS2Q8WU20 508 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 SCLYQ96I15 445 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 METTL22Q9BUU2 404 aaPredicted RBP7.34□□□□□ -1.23
SRRM1-213ENST00000485441 SLC52A2Q9HAB3 445 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 INTS7Q9NVH2 962 aaKnown RBP7.34□□□□□ -1.23
SRRM1-213ENST00000485441 ASXL2Q76L83 1435 aa7.34□□□□□ -1.23
SRRM1-213ENST00000485441 PRR19A6NJB7 356 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 IRS4O14654 1257 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-213ENST00000485441 DNAJC8O75937 253 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-213ENST00000485441 ZNF205O95201 554 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 MYCLP1P12525 358 aaPredicted RBP7.33□□□□□ -1.24
SRRM1-213ENST00000485441 FSTP19883 344 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 IGBP1P78318 339 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 CPSF6Q16630 551 aaKnown RBP eCLIP7.33□□□□□ -1.248e-10■□□□□ 9.4
SRRM1-213ENST00000485441 CLEC16AQ2KHT3 1053 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 SLC51AQ86UW1 340 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 PTPRN2Q92932 1015 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 GPATCH2Q9NW75 528 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 ZNF281Q9Y2X9 895 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 NPFFR2Q9Y5X5 522 aa7.33□□□□□ -1.24
SRRM1-213ENST00000485441 hCG_2014768A0A024R1R8 64 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 FAM155AB1AL88 458 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 GDF11O95390 407 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 CEACAM5P06731 702 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 THBDP07204 575 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 IFNGR1P15260 489 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 STAT3P40763 770 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 ECI1P42126 302 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 NOP2P46087 812 aaKnown RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 DOC2BQ14184 412 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 ACBD5Q5T8D3 534 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 CDKAL1Q5VV42 579 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 FGD2Q7Z6J4 655 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 THAP5Q7Z6K1 395 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 RNF180Q86T96 592 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 ZDHHC13Q8IUH4 622 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 DDX1Q92499 740 aaKnown RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 FAM126AQ9BYI3 521 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 TRIT1Q9H3H1 467 aaKnown RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 GPRC5CQ9NQ84 441 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 TMEFF2Q9UIK5 374 aaPredicted RBP7.32□□□□□ -1.24
SRRM1-213ENST00000485441 SNX11Q9Y5W9 270 aa7.32□□□□□ -1.24
SRRM1-213ENST00000485441 STXBP3O00186 592 aa7.31□□□□□ -1.24
SRRM1-213ENST00000485441 GSC2O15499 205 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms