RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 IL6STP40189 918 aaPredicted RBP6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 GRIA4P48058 902 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 MPP2Q14168 576 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 SPRED3Q2MJR0 410 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 INTS5Q6P9B9 1019 aaKnown RBP6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 ARHGAP27Q6ZUM4 889 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 SPATC1Q76KD6 591 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 CCDC84Q86UT8 332 aaPredicted RBP6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 JAMLQ86YT9 394 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 DNAJC10Q8IXB1 793 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 SYNPOQ8N3V7 929 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 PMM1Q92871 262 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 PLAAQ9Y263 795 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 PCDHB5Q9Y5E4 795 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 TJP1Q07157 1748 aa6.96□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A087WZG4 1122 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A1B0GTH6 734 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 FAM181BA6NEQ2 426 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 TRPA1O75762 1119 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 BPNT1O95861 308 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 RARAP10276 462 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 ACPPP15309 386 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 CDKN1CP49918 316 aaPredicted RBP6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 EIF5P55010 431 aaKnown RBP6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 CLCQ05315 142 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 LSRQ86X29 649 aaPredicted RBP6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 CHAC2Q8WUX2 184 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 ZCCHC2Q9C0B9 1178 aaKnown RBP6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 GEMIN8Q9NWZ8 242 aaKnown RBP6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 MIS18AQ9NYP9 233 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 ZNRF3Q9ULT6 936 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 ATP8A1Q9Y2Q0 1164 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 SAMM50Q9Y512 469 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 USP16Q9Y5T5 823 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A0C4DFX4 3053 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
NHLRC3-205ENST00000485407 SLC35F4A4IF30 521 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 METTL12A8MUP2 240 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 B2RBV5 119 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 RFC4P35249 363 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CASP7P55210 303 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 EXOSC10Q01780 885 aaKnown RBP6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 HYAL2Q12891 473 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CCINQ13939 588 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 BRDTQ58F21 947 aaPredicted RBP6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CT47A1Q5JQC4 288 aaPredicted RBP6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 KANK3Q6NY19 840 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 WDR75Q8IWA0 830 aaKnown RBP6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 REXO1Q8N1G1 1221 aaKnown RBP6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 RNF217Q8TC41 542 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 GCC1Q96CN9 775 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 CNTNAP3Q9BZ76 1288 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 ZMYM5Q9UJ78 669 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 KCNH4Q9UQ05 1017 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 ZBTB1Q9Y2K1 713 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 ZNF521Q96K83 1311 aa6.94□□□□□ -1.3
NHLRC3-205ENST00000485407 LAMB4A4D0S4 1761 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 FAM221AA4D161 298 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 KHNYNO15037 678 aaKnown RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 PSAPP07602 524 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 MYCLP1P12525 358 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 VEGFAP15692 232 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 ITPKAP23677 461 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 ZNF157P51786 506 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 WDR44Q5JSH3 913 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 AXDND1Q5T1B0 1012 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 TMED8Q6PL24 325 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 C6orf15Q6UXA7 325 aaPredicted RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 LYSMD3Q7Z3D4 306 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 REC114Q7Z4M0 266 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 FAM178BQ8IXR5 827 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 ZSWIM2Q8NEG5 633 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 ASAP3Q8TDY4 903 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 C8orf48Q96LL4 319 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 PNMA5Q96PV4 448 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 SPOCK3Q9BQ16 436 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 GPAMQ9HCL2 828 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 MBIPQ9NS73 344 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 NARFQ9UHQ1 456 aa6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 LAS1LQ9Y4W2 734 aaKnown RBP6.93□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A096LPE4 126 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 A0A1W2PPZ6 126 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 CILPO75339 1184 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 EIF3JO75822 258 aaKnown RBP6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 A1BGP04217 495 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 RHOQP17081 205 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 KRT76Q01546 638 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 PPP2R3AQ06190 1150 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 CLEC4GQ6UXB4 293 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 RUFY4Q6ZNE9 571 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 AMIGO3Q86WK7 504 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 SMC5Q8IY18 1101 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 NIM1KQ8IY84 436 aa6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 GPR161Q8N6U8 529 aaKnown RBP6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 ST13P5Q8NFI4 369 aaPredicted RBP6.92□□□□□ -1.3
NHLRC3-205ENST00000485407 NANOS1Q8WY41 292 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms