RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 TMTC3Q6ZXV5 915 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 ADGRF4Q8IZF3 695 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 P2RX7Q99572 595 aaKnown RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 FAM117AQ9C073 453 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 ASCC2Q9H1I8 757 aaPredicted RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 KIAA1522Q9P206 1035 aaPredicted RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 PDHXO00330 501 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 CALM1P0DP23 149 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 CALM2P0DP24 149 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 CALM3P0DP25 149 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 HOXA7P31268 230 aaPredicted RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 STAT2P52630 851 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 ASPRV1Q53RT3 343 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 GPATCH4Q5T3I0 446 aaKnown RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 FASTKD5Q7L8L6 764 aaKnown RBP9.89□□□□□ -0.83
CDK13-205ENST00000484589 ATG4CQ96DT6 458 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 MAP3K14Q99558 947 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 JMJD4Q9H9V9 463 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 PRR12Q9ULL5 1215 aa9.89□□□□□ -0.83
CDK13-205ENST00000484589 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L15C9J2P7 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L13C9JLJ4 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L11C9JVI0 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L18D6R9N7 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L22D6RA61 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L17D6RBQ6 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L19D6RCP7 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L20D6RJB6 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 CLGNO14967 610 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 USP17L24Q0WX57 530 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 NOGQ13253 232 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 HOMER1Q86YM7 354 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 IFNL1Q8IU54 200 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 DDX11Q96FC9 970 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 AIFM3Q96NN9 605 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 V9GY48 417 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 NID2Q14112 1375 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 COL11A1P12107 1806 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 MANSC4A6NHS7 340 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 PPP1R11O60927 126 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 FDPSP14324 419 aaKnown RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 KIF5BP33176 963 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 TM4SF4P48230 202 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 MCM2P49736 904 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 RCAN1P53805 252 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 COG2Q14746 738 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 NSUN7Q8NE18 718 aaKnown RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 SREK1Q8WXA9 508 aaKnown RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 PIGSQ96S52 555 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 SLF1Q9BQI6 1058 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 RIOX1Q9H6W3 641 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 TXNRD2Q9NNW7 524 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 SH2B1Q9NRF2 756 aaPredicted RBP9.88□□□□□ -0.83
CDK13-205ENST00000484589 GJB4Q9NTQ9 266 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 FEM1BQ9UK73 627 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 MYH6P13533 1939 aa9.88□□□□□ -0.83
CDK13-205ENST00000484589 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 DHX16O60231 1041 aaKnown RBP9.87□□□□□ -0.83
CDK13-205ENST00000484589 IFNAR1P17181 557 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 DSG3P32926 999 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 FOSBP53539 338 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 SYDE2Q5VT97 1194 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 ANKRD23Q86SG2 305 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 HSCBQ8IWL3 235 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 DNAJC5GQ8N7S2 189 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 PRPF38AQ8NAV1 312 aaKnown RBP9.87□□□□□ -0.83
CDK13-205ENST00000484589 SHISA4Q96DD7 197 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 SLC26A6Q9BXS9 759 aa9.87□□□□□ -0.83
CDK13-205ENST00000484589 RBM28Q9NW13 759 aaKnown RBP9.87□□□□□ -0.83
CDK13-205ENST00000484589 VWA5AO00534 786 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 CPLX1O14810 134 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 ERCC3P19447 782 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 HERVK_113P62684 666 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 IRX3P78415 501 aaPredicted RBP9.86□□□□□ -0.83
CDK13-205ENST00000484589 CUL4AQ13619 759 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 PKN1Q16512 942 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 Q3C1V9 767 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 CCDC174Q6PII3 467 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 CHURC1Q8WUH1 139 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 BTBD7Q9P203 1132 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 RBPJLQ9UBG7 517 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 ADAMTS5Q9UNA0 930 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 ZNF536O15090 1300 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 DNAH12Q6ZR08 3092 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 CCDC196A0A1B0GTZ2 297 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 PTPDC1A2A3K4 754 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 PEX14O75381 377 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 MCCD1P59942 119 aaPredicted RBP9.86□□□□□ -0.83
CDK13-205ENST00000484589 TMEM132BQ14DG7 1078 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 QRICH1Q2TAL8 776 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 CPXCR1Q8N123 301 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 REPS2Q8NFH8 660 aa9.86□□□□□ -0.83
CDK13-205ENST00000484589 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
CDK13-205ENST00000484589 MTMR8Q96EF0 704 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms