RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZSCAN10Q96SZ4 725 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-209ENST00000484305 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
HDAC1-209ENST00000484305 MCM3APO60318 1980 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 H0YGN5 161 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 NT5C2P49902 561 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 ENAHQ8N8S7 591 aaPredicted RBP15.16■□□□□ 0.02
HDAC1-209ENST00000484305 TINF2Q9BSI4 451 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 KRT23Q9C075 422 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 C11orf49Q9H6J7 331 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 FBXO40Q9UH90 709 aa15.16■□□□□ 0.02
HDAC1-209ENST00000484305 SEPT4O43236 478 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 MSCO60682 206 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 CYP21A2P08686 494 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ALAS1P13196 640 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 TAL1P17542 331 aaPredicted RBP15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 CCDC178Q5BJE1 867 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ANO1Q5XXA6 986 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ANKRD35Q8N283 1001 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ANKS1AQ92625 1134 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 TRERF1Q96PN7 1200 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 RNF146Q9NTX7 359 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 TAF6LQ9Y6J9 622 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 PFASO15067 1338 aa15.15■□□□□ 0.02
HDAC1-209ENST00000484305 ICAM1P05362 532 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 COL6A1P12109 1028 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 TKFCQ3LXA3 575 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 MAP4K1Q92918 833 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 FGD4Q96M96 766 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 RANBP17Q9H2T7 1088 aaKnown RBP15.14■□□□□ 0.01
HDAC1-209ENST00000484305 KAT14Q9H8E8 782 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
HDAC1-209ENST00000484305 TNKSO95271 1327 aa15.14■□□□□ 0.01
HDAC1-209ENST00000484305 EVI5O60447 810 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 SNAI1O95863 264 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-209ENST00000484305 ZNF865P0CJ78 1059 aaPredicted RBP15.13■□□□□ 0.01
HDAC1-209ENST00000484305 GOLGA8HP0CJ92 632 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 CNTN2Q02246 1040 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 MAMDC4Q6UXC1 1216 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
HDAC1-209ENST00000484305 UBAC1Q9BSL1 405 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 CPVLQ9H3G5 476 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 A1CFQ9NQ94 594 aaKnown RBP15.13■□□□□ 0.01
HDAC1-209ENST00000484305 NRBP1Q9UHY1 535 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 CCPG1Q9ULG6 757 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 LCTP09848 1927 aa15.13■□□□□ 0.01
HDAC1-209ENST00000484305 E7EWF7 191 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 SEC23AQ15436 765 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 BMP2KLQ5H9B9 411 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 GPATCH4Q5T3I0 446 aaKnown RBP15.12■□□□□ 0.01
HDAC1-209ENST00000484305 GJC2Q5T442 439 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-209ENST00000484305 STOX1Q6ZVD7 989 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 ZNF467Q7Z7K2 595 aaPredicted RBP15.12■□□□□ 0.01
HDAC1-209ENST00000484305 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 UBA5Q9GZZ9 404 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 RBM8AQ9Y5S9 174 aaKnown RBP15.12■□□□□ 0.01
HDAC1-209ENST00000484305 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 SYNGAP1Q96PV0 1343 aa15.12■□□□□ 0.01
HDAC1-209ENST00000484305 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
HDAC1-209ENST00000484305 TRDNQ13061 729 aa15.11■□□□□ 0.01
HDAC1-209ENST00000484305 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
HDAC1-209ENST00000484305 FAM133AQ8N9E0 248 aa15.11■□□□□ 0.01
HDAC1-209ENST00000484305 ARRDC4Q8NCT1 418 aa15.11■□□□□ 0.01
HDAC1-209ENST00000484305 LSG1Q9H089 658 aaKnown RBP15.11■□□□□ 0.01
HDAC1-209ENST00000484305 MYH6P13533 1939 aa15.11■□□□□ 0.01
HDAC1-209ENST00000484305 SOWAHBA6NEL2 793 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 DNM1LO00429 736 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 NSMFQ6X4W1 530 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 KIAA1211Q6ZU35 1233 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 ARMCX2Q7L311 632 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 CCDC144CPQ8IYA2 1237 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 C7orf61Q8IZ16 206 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 NCOA7Q8NI08 942 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 LENG1Q96BZ8 264 aaPredicted RBP15.1■□□□□ 0.01
HDAC1-209ENST00000484305 SENP6Q9GZR1 1112 aaPredicted RBP15.1■□□□□ 0.01
HDAC1-209ENST00000484305 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
HDAC1-209ENST00000484305 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
HDAC1-209ENST00000484305 NFIBO00712 420 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 RARBP10826 455 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 AKR1A1P14550 325 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 LRRC41Q15345 812 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 LRRC26Q2I0M4 334 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 RALYLQ86SE5 291 aaKnown RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
HDAC1-209ENST00000484305 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
HDAC1-209ENST00000484305 XPNPEP3Q9NQH7 507 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms