RNA–Protein interactions for RNA: ENST00000483930.1

CTSS-205, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-205ENST00000483930 TRIM60Q495X7 471 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 RNF180Q86T96 592 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 ZNF444Q8N0Y2 327 aaPredicted RBP12.93□□□□□ -0.34
CTSS-205ENST00000483930 PRPF38AQ8NAV1 312 aaKnown RBP12.93□□□□□ -0.34
CTSS-205ENST00000483930 OSBP2Q969R2 916 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 DDX11Q96FC9 970 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 KCNK17Q96T54 332 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 CLIP2Q9UDT6 1046 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 ZNF214Q9UL59 606 aaPredicted RBP12.93□□□□□ -0.34
CTSS-205ENST00000483930 CNPY2Q9Y2B0 182 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 MYH4Q9Y623 1939 aa12.93□□□□□ -0.34
CTSS-205ENST00000483930 TAL1P17542 331 aaPredicted RBP12.92□□□□□ -0.34
CTSS-205ENST00000483930 GNAT2P19087 354 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 SLC4A3P48751 1232 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 SHHQ15465 462 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
CTSS-205ENST00000483930 REPS2Q8NFH8 660 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 APPBP2Q92624 585 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 BADQ92934 168 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
CTSS-205ENST00000483930 SLF1Q9BQI6 1058 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 TEX13BQ9BXU2 312 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 PHF24Q9UPV7 400 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 CTDP1Q9Y5B0 961 aaPredicted RBP12.92□□□□□ -0.34
CTSS-205ENST00000483930 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
CTSS-205ENST00000483930 PATL2C9JE40 543 aaKnown RBP12.91□□□□□ -0.34
CTSS-205ENST00000483930 ZBED4O75132 1171 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 NDUFB10O96000 172 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 PGK1P00558 417 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 ZNF865P0CJ78 1059 aaPredicted RBP12.91□□□□□ -0.34
CTSS-205ENST00000483930 AKR1A1P14550 325 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 TDO2P48775 406 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 TLE2Q04725 743 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
CTSS-205ENST00000483930 SH3RF1Q7Z6J0 888 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 CPXCR1Q8N123 301 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
CTSS-205ENST00000483930 MKL1Q969V6 931 aa12.91□□□□□ -0.34
CTSS-205ENST00000483930 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 GREB1LQ9C091 1923 aaPredicted RBP12.9□□□□□ -0.34
CTSS-205ENST00000483930 TRIM43BA6NCK2 446 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 GPAA1O43292 621 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 TRIM43Q96BQ3 446 aaPredicted RBP12.9□□□□□ -0.34
CTSS-205ENST00000483930 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
CTSS-205ENST00000483930 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 FEM1BQ9UK73 627 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 FAM184BQ9ULE4 1060 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 RIPK3Q9Y572 518 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 UNC80Q8N2C7 3258 aa12.9□□□□□ -0.34
CTSS-205ENST00000483930 IGKV6D-41A0A0C4DH26 115 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 PRDM1O75626 825 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 ZNF697Q5TEC3 545 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 MTMR4Q9NYA4 1195 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 MCM3APO60318 1980 aa12.89□□□□□ -0.35
CTSS-205ENST00000483930 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 A0A1W2PQ45 241 aaPredicted RBP12.88□□□□□ -0.35
CTSS-205ENST00000483930 A0A1W2PQY0 241 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 ERC2O15083 957 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 SNAI1O95863 264 aaPredicted RBP12.88□□□□□ -0.35
CTSS-205ENST00000483930 TTLL1O95922 423 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 SLC3A2P08195 630 aaKnown RBP12.88□□□□□ -0.35
CTSS-205ENST00000483930 CLTBP09497 229 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 RAG1P15918 1043 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 PDE4BQ07343 736 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 MAMDC4Q6UXC1 1216 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 ANKRD35Q8N283 1001 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 GUCD1Q96NT3 240 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 RAVER2Q9HCJ3 691 aaKnown RBP12.88□□□□□ -0.35
CTSS-205ENST00000483930 EPB41L4AQ9HCS5 686 aaPredicted RBP12.88□□□□□ -0.35
CTSS-205ENST00000483930 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 SYNPO2Q9UMS6 1093 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 VPS9D1Q9Y2B5 631 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 ROBO3Q96MS0 1386 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
CTSS-205ENST00000483930 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 M0R2C6 588 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 PQBP1O60828 265 aaKnown RBP12.87□□□□□ -0.35
CTSS-205ENST00000483930 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
CTSS-205ENST00000483930 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 FDX1P10109 184 aa12.87□□□□□ -0.35
CTSS-205ENST00000483930 ACLYP53396 1101 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms