RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GLT1D1Q96MS3 346 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 SLC38A10Q9HBR0 1119 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 ZBTB40Q9NUA8 1239 aa15.48■□□□□ 0.07
UBR4-213ENST00000483922 YBX2Q9Y2T7 364 aaKnown RBP15.48■□□□□ 0.07
UBR4-213ENST00000483922 SOWAHBA6NEL2 793 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 TRANK1O15050 2925 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 COPB2P35606 906 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 PPIGQ13427 754 aaKnown RBP eCLIP15.47■□□□□ 0.077e-8■■□□□ 13.5
UBR4-213ENST00000483922 CCDC85BQ15834 202 aaPredicted RBP15.47■□□□□ 0.07
UBR4-213ENST00000483922 GNASQ5JWF2 1037 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 AKNAD1Q5T1N1 836 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 MKL1Q969V6 931 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 ASB2Q96Q27 587 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 CLIP2Q9UDT6 1046 aa15.47■□□□□ 0.07
UBR4-213ENST00000483922 RAB11FIP3O75154 756 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 CCDC129Q6ZRS4 1044 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 ARMCX2Q7L311 632 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 CCDC144CPQ8IYA2 1237 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 ATXN2LQ8WWM7 1075 aaKnown RBP15.46■□□□□ 0.07
UBR4-213ENST00000483922 HERVK_113Q902F9 699 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 OSBP2Q969R2 916 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 KIFC2Q96AC6 838 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 NKX2-4Q9H2Z4 354 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 ABHD16BQ9H3Z7 469 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 IL23AQ9NPF7 189 aa15.46■□□□□ 0.07
UBR4-213ENST00000483922 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 SMARCA5O60264 1052 aaPredicted RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 CXCL17Q6UXB2 119 aa15.45■□□□□ 0.06
UBR4-213ENST00000483922 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
UBR4-213ENST00000483922 PCSK9Q8NBP7 692 aaKnown RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 VTI1AQ96AJ9 217 aa15.45■□□□□ 0.06
UBR4-213ENST00000483922 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.45■□□□□ 0.064e-14■■■■■ 42.1
UBR4-213ENST00000483922 EPB41L4AQ9HCS5 686 aaPredicted RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 ARPP21Q9UBL0 812 aaPredicted RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 GNEQ9Y223 722 aaKnown RBP15.45■□□□□ 0.06
UBR4-213ENST00000483922 MCM3APO60318 1980 aa15.45■□□□□ 0.06
UBR4-213ENST00000483922 ZNF536O15090 1300 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 MROH7Q68CQ1 1323 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 MINDY4BA8MYZ0 360 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 ZBED4O75132 1171 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 PRDM1O75626 825 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 MYOGP15173 224 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 RABGGTBP53611 331 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 ANKRD35Q8N283 1001 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 FAM133AQ8N9E0 248 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 ADAMTS19Q8TE59 1207 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 CEP95Q96GE4 821 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 GAS2L1Q99501 681 aaPredicted RBP15.44■□□□□ 0.06
UBR4-213ENST00000483922 WNT8AQ9H1J5 351 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 PDGFCQ9NRA1 345 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 MTMR4Q9NYA4 1195 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 COG6Q9Y2V7 657 aa15.44■□□□□ 0.06
UBR4-213ENST00000483922 FGBP02675 491 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 HNRNPUQ00839 825 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBR4-213ENST00000483922 TAPT1Q6NXT6 567 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
UBR4-213ENST00000483922 AGBL1Q96MI9 1066 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 NECAB3Q96P71 396 aaPredicted RBP15.43■□□□□ 0.06
UBR4-213ENST00000483922 PURBQ96QR8 312 aaKnown RBP15.43■□□□□ 0.06
UBR4-213ENST00000483922 TRPV6Q9H1D0 765 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 MKNK2Q9HBH9 465 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 THEGQ9P2T0 379 aa15.43■□□□□ 0.06
UBR4-213ENST00000483922 GBF1Q92538 1859 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 BMP1P13497 986 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 SMPD1P17405 629 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 IGFBP4P22692 258 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 CCL23P55773 120 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 MRPS5P82675 430 aaKnown RBP15.42■□□□□ 0.06
UBR4-213ENST00000483922 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 PSRC1Q6PGN9 363 aaPredicted RBP15.42■□□□□ 0.06
UBR4-213ENST00000483922 CHST13Q8NET6 341 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
UBR4-213ENST00000483922 HOMER2Q9NSB8 354 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 FEM1BQ9UK73 627 aa15.42■□□□□ 0.06
UBR4-213ENST00000483922 MYH7P12883 1935 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 RBAK-RBAKDNI3L0D1 243 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 M0R2C6 588 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 OAZ1P54368 228 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 SNAP25P60880 206 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 PSMC6P62333 389 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 ITGA7Q13683 1181 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 GIMAP6Q6P9H5 292 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 GMCL1P1Q8NEA9 526 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 CHMP4CQ96CF2 233 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 NOC4LQ9BVI4 516 aaKnown RBP15.41■□□□□ 0.06
UBR4-213ENST00000483922 HIPK3Q9H422 1215 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
UBR4-213ENST00000483922 TMEM232C9JQI7 657 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 RFXAPO00287 272 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 DYNC1LI2O43237 492 aaPredicted RBP15.4■□□□□ 0.06
UBR4-213ENST00000483922 B4GALT4O60513 344 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 HMMRO75330 724 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 TFF2Q03403 129 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 RAB30Q15771 203 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 TSHZ3Q63HK5 1081 aa15.4■□□□□ 0.06
UBR4-213ENST00000483922 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms