RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 LBX2Q6XYB7 198 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 REPS2Q8NFH8 660 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
SRSF6-202ENST00000483871 RAVER2Q9HCJ3 691 aaKnown RBP16.37■□□□□ 0.21
SRSF6-202ENST00000483871 ZNF536O15090 1300 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 ZBTB5O15062 677 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
SRSF6-202ENST00000483871 ZBED4O75132 1171 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
SRSF6-202ENST00000483871 SMARCC2Q8TAQ2 1214 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 RRP36Q96EU6 259 aaKnown RBP16.36■□□□□ 0.21
SRSF6-202ENST00000483871 AGBL1Q96MI9 1066 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 AIFM3Q96NN9 605 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
SRSF6-202ENST00000483871 RNF26Q9BY78 433 aaPredicted RBP16.36■□□□□ 0.21
SRSF6-202ENST00000483871 MYPNQ86TC9 1320 aa16.36■□□□□ 0.21
SRSF6-202ENST00000483871 COL11A1P12107 1806 aaPredicted RBP16.35■□□□□ 0.21
SRSF6-202ENST00000483871 PNMA6FA0A0J9YX94 578 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 CNMDO75829 334 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 CDKL5O76039 1030 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 CRHR2Q13324 411 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
SRSF6-202ENST00000483871 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
SRSF6-202ENST00000483871 ORC3Q9UBD5 711 aaPredicted RBP16.35■□□□□ 0.21
SRSF6-202ENST00000483871 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
SRSF6-202ENST00000483871 ZNF214Q9UL59 606 aaPredicted RBP16.35■□□□□ 0.21
SRSF6-202ENST00000483871 TRPA1O75762 1119 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
SRSF6-202ENST00000483871 BECN1Q14457 450 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 PLS1Q14651 629 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 USH1GQ495M9 461 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.213e-8■■□□□ 11.5
SRSF6-202ENST00000483871 COA7Q96BR5 231 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 LLPHQ9BRT6 129 aaKnown RBP16.34■□□□□ 0.21
SRSF6-202ENST00000483871 RNF186Q9NXI6 227 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 RIPK3Q9Y572 518 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 CTDP1Q9Y5B0 961 aaPredicted RBP16.34■□□□□ 0.21
SRSF6-202ENST00000483871 MYH6P13533 1939 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 CA12O43570 354 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 TLR2O60603 784 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 TBC1D8O95759 1140 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 ZFYVE28Q9HCC9 887 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
SRSF6-202ENST00000483871 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
SRSF6-202ENST00000483871 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.34■□□□□ 0.21
SRSF6-202ENST00000483871 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.2
SRSF6-202ENST00000483871 DEXIO95424 95 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 ALDH1A1P00352 501 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 FDX1P10109 184 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 GJB2P29033 226 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 STAT3P40763 770 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
SRSF6-202ENST00000483871 FBXO11Q86XK2 927 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 SHISA4Q96DD7 197 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 SMC3Q9UQE7 1217 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.2
SRSF6-202ENST00000483871 ICAM1P05362 532 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
SRSF6-202ENST00000483871 SCG2P13521 617 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 ERVK-9P63128 1117 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 ERVK-24P63145 666 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 WWC2Q6AWC2 1192 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
SRSF6-202ENST00000483871 TYW1BQ6NUM6 668 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 C17orf99Q6UX52 265 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 HEATR3Q7Z4Q2 680 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 INTS4Q96HW7 963 aaKnown RBP16.32■□□□□ 0.2
SRSF6-202ENST00000483871 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 CCPG1Q9ULG6 757 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 PCDHA1Q9Y5I3 950 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 ADGRA2Q96PE1 1338 aa16.32■□□□□ 0.2
SRSF6-202ENST00000483871 ALAS1P13196 640 aa16.31■□□□□ 0.2
SRSF6-202ENST00000483871 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
SRSF6-202ENST00000483871 FOSBP53539 338 aa16.31■□□□□ 0.2
SRSF6-202ENST00000483871 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
SRSF6-202ENST00000483871 HOMER2Q9NSB8 354 aa16.31■□□□□ 0.2
SRSF6-202ENST00000483871 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
SRSF6-202ENST00000483871 STK36Q9NRP7 1315 aa16.31■□□□□ 0.2
SRSF6-202ENST00000483871 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 BCRP11274 1271 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 HMGN5P82970 282 aaKnown RBP16.3■□□□□ 0.2
SRSF6-202ENST00000483871 FAM184AQ8NB25 1140 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 GPRC5AQ8NFJ5 357 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 ALG1Q9BT22 464 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 TEX13BQ9BXU2 312 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 PORCNQ9H237 461 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 THSD7BQ9C0I4 1608 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 OAZ1P54368 228 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
SRSF6-202ENST00000483871 TBC1D5Q92609 795 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 EFCC1Q9HA90 598 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 BARHL2Q9NY43 387 aa16.3■□□□□ 0.2
SRSF6-202ENST00000483871 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms