RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 VGLL4Q14135 290 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 SLC39A14Q15043 492 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 PPP1R18Q6NYC8 613 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 FEM1BQ9UK73 627 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 AFG3L2Q9Y4W6 797 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 PCDHB6Q9Y5E3 794 aa11.59□□□□□ -0.55
HDAC6-226ENST00000483656 PPP1R12BO60237 982 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 MBD3O95983 291 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 STAT2P52630 851 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 IKQ13123 557 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 STK38Q15208 465 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 MAP3K11Q16584 847 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 PIK3AP1Q6ZUJ8 805 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 CCDC12Q8WUD4 166 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 CHURC1Q8WUH1 139 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 LPAR1Q92633 364 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 C12orf42Q96LP6 360 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 RANBP17Q9H2T7 1088 aaKnown RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 C6orf50Q9HD87 102 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
HDAC6-226ENST00000483656 TMEM260Q9NX78 707 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 PCDHA7Q9UN72 937 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 OTOFQ9HC10 1997 aa11.58□□□□□ -0.56
HDAC6-226ENST00000483656 TRIM75PA6NK02 468 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 TRAF5O00463 557 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 SPTLC2O15270 562 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 EDIL3O43854 480 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 LIG1P18858 919 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 VCAM1P19320 739 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 GNA11P29992 359 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 IREB2P48200 963 aaKnown RBP11.57□□□□□ -0.56
HDAC6-226ENST00000483656 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
HDAC6-226ENST00000483656 ADCY7P51828 1080 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 USP14P54578 494 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 TPRNQ4KMQ1 711 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 AXDND1Q5T1B0 1012 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-226ENST00000483656 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 KIFC2Q96AC6 838 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 CLMNQ96JQ2 1002 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 AMNQ9BXJ7 453 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 RIC8AQ9NPQ8 531 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 TMEM63CQ9P1W3 806 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 BIN2Q9UBW5 565 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-226ENST00000483656 PCDHA1Q9Y5I3 950 aa11.57□□□□□ -0.56
HDAC6-226ENST00000483656 C19orf81C9J6K1 198 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 OPLAHO14841 1288 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 PPP6R2O75170 966 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 MARCKSP29966 332 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-226ENST00000483656 NF2P35240 595 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 TRAPPC10P48553 1259 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 HMGCS2P54868 508 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 TTC38Q5R3I4 469 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 LDLRAD1Q5T700 205 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 JAKMIP3Q5VZ66 844 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 CAVIN1Q6NZI2 390 aaKnown RBP11.56□□□□□ -0.56
HDAC6-226ENST00000483656 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 P2RX7Q99572 595 aaKnown RBP11.56□□□□□ -0.56
HDAC6-226ENST00000483656 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-226ENST00000483656 ELP3Q9H9T3 547 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 NMRK2Q9NPI5 230 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 MRVI1Q9Y6F6 885 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 MORC2Q9Y6X9 1032 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-226ENST00000483656 ZNF536O15090 1300 aa11.56□□□□□ -0.56
HDAC6-226ENST00000483656 ME1P48163 572 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 ZNF174Q15697 407 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 UBE2SQ16763 222 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 INF2Q27J81 1249 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 USH1GQ495M9 461 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 ADALQ6DHV7 355 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 CCDC174Q6PII3 467 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 KRT25Q7Z3Z0 450 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
HDAC6-226ENST00000483656 C4orf32Q8N8J7 132 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
HDAC6-226ENST00000483656 BICD2Q8TD16 824 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 GZF1Q9H116 711 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-226ENST00000483656 GOLPH3LQ9H4A5 285 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 FBXO2Q9UK22 296 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-226ENST00000483656 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 NOL7Q9UMY1 257 aaKnown RBP11.55□□□□□ -0.56
HDAC6-226ENST00000483656 CSADQ9Y600 493 aa11.55□□□□□ -0.56
HDAC6-226ENST00000483656 SMCHD1A6NHR9 2005 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 CCDC194A0A1B0GVG4 234 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 SPDYE5A6NIY4 337 aa11.54□□□□□ -0.56
HDAC6-226ENST00000483656 USP17L15C9J2P7 530 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms