RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 hCG_1642624A0A1W2PR95 340 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 DTNBO60941 627 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 GNAQP50148 359 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 SP3Q02447 781 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 WDR78Q5VTH9 848 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 SNRNP48Q6IEG0 339 aaKnown RBP20.71■□□□□ 0.91
CPNE1-224ENST00000483359 NECAB1Q8N987 351 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 AGBL1Q96MI9 1066 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 PIGSQ96S52 555 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 PORCNQ9H237 461 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 NID2Q14112 1375 aa20.71■□□□□ 0.91
CPNE1-224ENST00000483359 ZNF536O15090 1300 aa20.7■□□□□ 0.91
CPNE1-224ENST00000483359 HSPA8P11142 646 aaKnown RBP20.7■□□□□ 0.9
CPNE1-224ENST00000483359 SCRN1Q12765 414 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 MOV10L1Q9BXT6 1211 aaKnown RBP20.7■□□□□ 0.9
CPNE1-224ENST00000483359 ARHGAP39Q9C0H5 1083 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 HOMER2Q9NSB8 354 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 USH1GQ495M9 461 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 CCAR1Q8IX12 1150 aaKnown RBP20.7■□□□□ 0.9
CPNE1-224ENST00000483359 TEX13BQ9BXU2 312 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 RIOX1Q9H6W3 641 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 EFCC1Q9HA90 598 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 LIMCH1Q9UPQ0 1083 aa20.7■□□□□ 0.9
CPNE1-224ENST00000483359 CNTNAP5Q8WYK1 1306 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 MYH6P13533 1939 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 CCDC196A0A1B0GTZ2 297 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 STAT3P40763 770 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 LBX1P52954 281 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 NCAPG2Q86XI2 1143 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 CD99L2Q8TCZ2 262 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 PHKBQ93100 1093 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 LZTS2Q9BRK4 669 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 SPZ1Q9BXG8 430 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 RIPK3Q9Y572 518 aa20.69■□□□□ 0.9
CPNE1-224ENST00000483359 CPLX1O14810 134 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 PFKFB2O60825 505 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 FKTNO75072 461 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 FDX1P10109 184 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-224ENST00000483359 ERCC3P19447 782 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 CTGFP29279 349 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 CCNA1P78396 465 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 CAP1Q01518 475 aa20.68■□□□□ 0.9
CPNE1-224ENST00000483359 CWC22Q9HCG8 908 aaKnown RBP20.68■□□□□ 0.9
CPNE1-224ENST00000483359 ZBTB5O15062 677 aa20.67■□□□□ 0.9
CPNE1-224ENST00000483359 ICAM1P05362 532 aa20.67■□□□□ 0.9
CPNE1-224ENST00000483359 ALAS1P13196 640 aa20.67■□□□□ 0.9
CPNE1-224ENST00000483359 CTCFP49711 727 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-224ENST00000483359 PPP2R5BQ15173 497 aa20.67■□□□□ 0.9
CPNE1-224ENST00000483359 RRP36Q96EU6 259 aaKnown RBP20.67■□□□□ 0.9
CPNE1-224ENST00000483359 SEC63Q9UGP8 760 aaKnown RBP20.67■□□□□ 0.9
CPNE1-224ENST00000483359 PPP1R11O60927 126 aaPredicted RBP20.66■□□□□ 0.9
CPNE1-224ENST00000483359 OAZ1P54368 228 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 FUT2Q10981 343 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 GTF3C6Q969F1 213 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 CASP8AP2Q9UKL3 1982 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 ATP2A1O14983 1001 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 PSMC4P43686 418 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 ST3GAL1Q11201 340 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 NTRK3Q16288 839 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 RIOX2Q8IUF8 465 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 MTMR8Q96EF0 704 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 SMCHD1A6NHR9 2005 aa20.66■□□□□ 0.9
CPNE1-224ENST00000483359 MGAMO43451 1857 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 FMNL1O95466 1100 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-224ENST00000483359 KIF22Q14807 665 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 FBXO11Q86XK2 927 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 SLC26A6Q9BXS9 759 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 V9GY48 417 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-224ENST00000483359 TNPO2O14787 897 aaKnown RBP20.65■□□□□ 0.9
CPNE1-224ENST00000483359 SMARCA1P28370 1054 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 NOM1Q5C9Z4 860 aaKnown RBP20.65■□□□□ 0.9
CPNE1-224ENST00000483359 ERO1AQ96HE7 468 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 TRIM47Q96LD4 638 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 RNF146Q9NTX7 359 aa20.65■□□□□ 0.9
CPNE1-224ENST00000483359 PNMA6FA0A0J9YX94 578 aa20.64■□□□□ 0.89
CPNE1-224ENST00000483359 FCGRTP55899 365 aa20.64■□□□□ 0.89
CPNE1-224ENST00000483359 GPR142Q7Z601 462 aa20.64■□□□□ 0.89
CPNE1-224ENST00000483359 TRERF1Q96PN7 1200 aa20.64■□□□□ 0.89
CPNE1-224ENST00000483359 AMNQ9BXJ7 453 aa20.64■□□□□ 0.89
CPNE1-224ENST00000483359 SLC25A27O95847 323 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 IFNAR1P17181 557 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 MAPK4P31152 587 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 CPLX2Q6PUV4 134 aaKnown RBP20.63■□□□□ 0.89
CPNE1-224ENST00000483359 GPKOWQ92917 476 aaPredicted RBP eCLIP20.63■□□□□ 0.891e-7■■■■□ 26.1
CPNE1-224ENST00000483359 COA7Q96BR5 231 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 TMX3Q96JJ7 454 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 ZSCAN31Q96LW9 406 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-224ENST00000483359 PCDHA1Q9Y5I3 950 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 PLXNB2O15031 1838 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 HEATR3Q7Z4Q2 680 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 SH2B1Q9NRF2 756 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-224ENST00000483359 IVNS1ABPQ9Y6Y0 642 aa20.63■□□□□ 0.89
CPNE1-224ENST00000483359 CTDNEP1O95476 244 aa20.62■□□□□ 0.89
CPNE1-224ENST00000483359 SHCBP1Q8NEM2 672 aa20.62■□□□□ 0.89
CPNE1-224ENST00000483359 MROH8Q9H579 483 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms