RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
VARS-226ENST00000483275 INCENPQ9NQS7 918 aa16.57■□□□□ 0.24
VARS-226ENST00000483275 FEM1BQ9UK73 627 aa16.57■□□□□ 0.24
VARS-226ENST00000483275 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
VARS-226ENST00000483275 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.56■□□□□ 0.24
VARS-226ENST00000483275 DCDC2CA8MYV0 355 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 ATP2A1O14983 1001 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 NMT2O60551 498 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 ZFYP08048 801 aaPredicted RBP16.56■□□□□ 0.24
VARS-226ENST00000483275 BMP3P12645 472 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 FOSL2P15408 326 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 GNAT2P19087 354 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 BEX3Q00994 111 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
VARS-226ENST00000483275 ANKRD33Q7Z3H0 272 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 VTI1AQ96AJ9 217 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 TSEN34Q9BSV6 310 aaKnown RBP16.56■□□□□ 0.24
VARS-226ENST00000483275 TBX21Q9UL17 535 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
VARS-226ENST00000483275 ASTN1O14525 1302 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
VARS-226ENST00000483275 FOXP2O15409 715 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 DUSP11O75319 330 aaKnown RBP16.55■□□□□ 0.24
VARS-226ENST00000483275 ASGR1P07306 291 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 TFAP4Q01664 338 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 CTDSPL2Q05D32 466 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 PPARAQ07869 468 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 CCDC174Q6PII3 467 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 MSL3Q8N5Y2 521 aaKnown RBP16.55■□□□□ 0.24
VARS-226ENST00000483275 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 MKL1Q969V6 931 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■□□□ 14.4
VARS-226ENST00000483275 PPP1R12CQ9BZL4 782 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 KATNBL1Q9H079 304 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 NAPBQ9H115 298 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 RNF146Q9NTX7 359 aa16.55■□□□□ 0.24
VARS-226ENST00000483275 ZNF536O15090 1300 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 MOXD2PA6NHM9 499 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 GRXCR1A8MXD5 290 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 CTAGE5O15320 804 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 MCCP23508 829 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 DNAJB2P25686 324 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 KCTD1Q719H9 257 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 ZNF467Q7Z7K2 595 aaPredicted RBP16.54■□□□□ 0.24
VARS-226ENST00000483275 NEDD1Q8NHV4 660 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 GLT1D1Q96MS3 346 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 UPF3AQ9H1J1 476 aaKnown RBP16.54■□□□□ 0.24
VARS-226ENST00000483275 A1CFQ9NQ94 594 aaKnown RBP16.54■□□□□ 0.24
VARS-226ENST00000483275 REV3LO60673 3130 aa16.54■□□□□ 0.24
VARS-226ENST00000483275 SOWAHBA6NEL2 793 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 TIMP1P01033 207 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ACRP10323 421 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ALAS1P13196 640 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 CSF2RAP15509 400 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 CST5P28325 142 aaPredicted RBP16.53■□□□□ 0.24
VARS-226ENST00000483275 STAT2P52630 851 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 PDE4BQ07343 736 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 GNASQ5JWF2 1037 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
VARS-226ENST00000483275 EEPD1Q7L9B9 569 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 USP38Q8NB14 1042 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 PURBQ96QR8 312 aaKnown RBP16.53■□□□□ 0.24
VARS-226ENST00000483275 NACAP1Q9BZK3 213 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ABHD16BQ9H3Z7 469 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ACAD9Q9H845 621 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 ZNF287Q9HBT7 754 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 FBXO40Q9UH90 709 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
VARS-226ENST00000483275 PBX2P40425 430 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 SLC1A4P43007 532 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 OAZ1P54368 228 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 GJA9P57773 515 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 VPS53Q5VIR6 699 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.52■□□□□ 0.24
VARS-226ENST00000483275 C16orf59Q7L2K0 433 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 FBXO16Q8IX29 292 aaPredicted RBP16.52■□□□□ 0.24
VARS-226ENST00000483275 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.24
VARS-226ENST00000483275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
VARS-226ENST00000483275 UMODL1Q5DID0 1318 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 TTC41PQ6P2S7 1318 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
VARS-226ENST00000483275 CYP2C18P33260 490 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 CDK7P50613 346 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 TRERF1Q96PN7 1200 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 SPC25Q9HBM1 224 aa16.51■□□□□ 0.23
VARS-226ENST00000483275 PDGFCQ9NRA1 345 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms