RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 TMEM87BQ96K49 555 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 NHEJ1Q9H9Q4 299 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 AGPAT5Q9NUQ2 364 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 HAUS2Q9NVX0 235 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 MYH13Q9UKX3 1938 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 TRIM49BA6NDI0 452 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 E7EVH7 732 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 WNT7AO00755 349 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CXCR5P32302 372 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 CYLC1P35663 651 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 MDH1P40925 334 aaKnown RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 SGMS1Q86VZ5 419 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 FUKQ8N0W3 1084 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 FNBP4Q8N3X1 1017 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-205ENST00000483122 WASF1Q92558 559 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 RUBCNQ92622 972 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 SGSM3Q96HU1 749 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 SLC12A7Q9Y666 1083 aa13.17□□□□□ -0.3
VTI1A-205ENST00000483122 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 PARP4Q9UKK3 1724 aaKnown RBP13.16□□□□□ -0.3
VTI1A-205ENST00000483122 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 DNM1LO00429 736 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 RTN2O75298 545 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 CHRNA2Q15822 529 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 MEA1Q16626 185 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 LRWD1Q9UFC0 647 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 MYH10P35580 1976 aa13.16□□□□□ -0.3
VTI1A-205ENST00000483122 OPLAHO14841 1288 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF263O14978 683 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 FAM107AO95990 144 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 KLK7P49862 253 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF507Q8TCN5 953 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 SHISA4Q96DD7 197 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 OSBPL9Q96SU4 736 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 MTRQ99707 1265 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ZSCAN5CA6NGD5 496 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 LGALS16A8MUM7 142 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ITIH3Q06033 890 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ZNF496Q96IT1 587 aaPredicted RBP13.15□□□□□ -0.3
VTI1A-205ENST00000483122 GGA2Q9UJY4 613 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 SLIT2O94813 1529 aa13.15□□□□□ -0.3
VTI1A-205ENST00000483122 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 H7C1W4 665 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 NCK2O43639 380 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 SKAP2O75563 359 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 MOCS3O95396 460 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 RPSAP08865 295 aaKnown RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 PRCPP42785 496 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 VAV2P52735 878 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 DRP2Q13474 957 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 CEP120Q8N960 986 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM6Q9C030 488 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 RBM12Q9NTZ6 932 aaKnown RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 COL5A2P05997 1499 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 MYH7P12883 1935 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 GLI1P08151 1106 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 PMS1P54277 932 aaKnown RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 C8orf74Q6P047 294 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 FMNL3Q8IVF7 1028 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 ACTR5Q9H9F9 607 aaPredicted RBP13.14□□□□□ -0.31
VTI1A-205ENST00000483122 ZSWIM5Q9P217 1185 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
VTI1A-205ENST00000483122 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
VTI1A-205ENST00000483122 PPP1R12BO60237 982 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms