RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CCDC174Q6PII3 467 aa14.26□□□□□ -0.13
HDLBP-239ENST00000483086 MFSD6Q6ZSS7 791 aa14.26□□□□□ -0.13
HDLBP-239ENST00000483086 PURBQ96QR8 312 aaKnown RBP14.26□□□□□ -0.13
HDLBP-239ENST00000483086 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
HDLBP-239ENST00000483086 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
HDLBP-239ENST00000483086 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
HDLBP-239ENST00000483086 BAZ2BQ9UIF8 2168 aaKnown RBP14.26□□□□□ -0.13
HDLBP-239ENST00000483086 COL6A3P12111 3177 aa14.26□□□□□ -0.13
HDLBP-239ENST00000483086 ZNF213O14771 459 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 KDM4AO75164 1064 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
HDLBP-239ENST00000483086 SYN1P17600 705 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 CAPN2P17655 700 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 PTGS1P23219 599 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 FXR1P51114 621 aaKnown RBP eCLIP14.25□□□□□ -0.136e-7■□□□□ 11.2
HDLBP-239ENST00000483086 OAZ1P54368 228 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 FAM160B2Q86V87 743 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 DCAF4Q8WV16 495 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 KATNBL1Q9H079 304 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 RANBP17Q9H2T7 1088 aaKnown RBP14.25□□□□□ -0.13
HDLBP-239ENST00000483086 GPCPD1Q9NPB8 672 aa14.25□□□□□ -0.13
HDLBP-239ENST00000483086 A1CFQ9NQ94 594 aaKnown RBP14.25□□□□□ -0.13
HDLBP-239ENST00000483086 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
HDLBP-239ENST00000483086 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 GOLGA8HP0CJ92 632 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 COPB2P35606 906 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
HDLBP-239ENST00000483086 CCDC96Q2M329 555 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 FAM133AQ8N9E0 248 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 CHURC1Q8WUH1 139 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 RNF146Q9NTX7 359 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 ZSWIM5Q9P217 1185 aa14.24□□□□□ -0.13
HDLBP-239ENST00000483086 HIP1O00291 1037 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 CYP21A2P08686 494 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 ALAS1P13196 640 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-239ENST00000483086 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 IKQ13123 557 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-239ENST00000483086 LRRC41Q15345 812 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 TMEM63BQ5T3F8 832 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 STOX1Q6ZVD7 989 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 ENAHQ8N8S7 591 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-239ENST00000483086 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 DDX11Q96FC9 970 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 TRERF1Q96PN7 1200 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 SENP6Q9GZR1 1112 aaPredicted RBP14.23□□□□□ -0.13
HDLBP-239ENST00000483086 SLC5A4Q9NY91 659 aa14.23□□□□□ -0.13
HDLBP-239ENST00000483086 MYADML2A6NDP7 307 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 DNM1LO00429 736 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 MSCO60682 206 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 ADAMTS4O75173 837 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 PGK1P00558 417 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 PCP11498 1178 aaKnown RBP14.22□□□□□ -0.13
HDLBP-239ENST00000483086 SYDE2Q5VT97 1194 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 ANKRD35Q8N283 1001 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 ESR2Q92731 530 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 GDF15Q99988 308 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 ACAD9Q9H845 621 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 SENP2Q9HC62 589 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.22□□□□□ -0.13
HDLBP-239ENST00000483086 NR2E3Q9Y5X4 410 aa14.22□□□□□ -0.13
HDLBP-239ENST00000483086 RAD50Q92878 1312 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 SYNGAP1Q96PV0 1343 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 NFIBO00712 420 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 SGSM2O43147 1006 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 ICAM1P05362 532 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 FDX1P10109 184 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 SEC23AQ15436 765 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 SLC35G1Q2M3R5 365 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 ZNF467Q7Z7K2 595 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-239ENST00000483086 CCDC144CPQ8IYA2 1237 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 CLEC4DQ8WXI8 215 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 FERMT2Q96AC1 680 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 TTC14Q96N46 770 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 UBA5Q9GZZ9 404 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 RNF41Q9H4P4 317 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-239ENST00000483086 CYP39A1Q9NYL5 469 aa14.21□□□□□ -0.13
HDLBP-239ENST00000483086 CTDP1Q9Y5B0 961 aaPredicted RBP14.21□□□□□ -0.13
HDLBP-239ENST00000483086 EYSQ5T1H1 3165 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 TNKSO95271 1327 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 SYNRGQ9UMZ2 1314 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 CTAGE5O15320 804 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 ADCYAP1R1P41586 468 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 MAGEA10P43363 369 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 IMMTQ16891 758 aaKnown RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 DGKHQ86XP1 1220 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 PNMA1Q8ND90 353 aa14.2□□□□□ -0.14
HDLBP-239ENST00000483086 ZSCAN10Q96SZ4 725 aaPredicted RBP14.2□□□□□ -0.14
HDLBP-239ENST00000483086 XPNPEP3Q9NQH7 507 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms