RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
VARS-225ENST00000482996 SEPT4O43236 478 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 SLC16A2P36021 539 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 PTH1RQ03431 593 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 MSL3Q8N5Y2 521 aaKnown RBP16.29■□□□□ 0.2
VARS-225ENST00000482996 ANKS1AQ92625 1134 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 RNF146Q9NTX7 359 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 ZSWIM5Q9P217 1185 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 PCDH10Q9P2E7 1040 aa16.29■□□□□ 0.2
VARS-225ENST00000482996 ZNF536O15090 1300 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 DNAJC25-GNG10A0A024R161 153 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 H0YGN5 161 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 EVI5O60447 810 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 NEFLP07196 543 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 ALAS1P13196 640 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 MNX1P50219 401 aaPredicted RBP16.28■□□□□ 0.2
VARS-225ENST00000482996 SNAP25P60880 206 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
VARS-225ENST00000482996 PNMA1Q8ND90 353 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
VARS-225ENST00000482996 PNMA2Q9UL42 364 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 CNPY2Q9Y2B0 182 aa16.28■□□□□ 0.2
VARS-225ENST00000482996 TNKSO95271 1327 aa16.27■□□□□ 0.2
VARS-225ENST00000482996 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.2
VARS-225ENST00000482996 POTEB2H3BUK9 544 aa16.27■□□□□ 0.2
VARS-225ENST00000482996 ICAM1P05362 532 aa16.27■□□□□ 0.2
VARS-225ENST00000482996 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.2
VARS-225ENST00000482996 ENAHQ8N8S7 591 aaPredicted RBP16.27■□□□□ 0.2
VARS-225ENST00000482996 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
VARS-225ENST00000482996 PFASO15067 1338 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 CYP21A2P08686 494 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 BMP2KLQ5H9B9 411 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 IFIT1BQ5T764 474 aaKnown RBP16.26■□□□□ 0.19
VARS-225ENST00000482996 MAMDC4Q6UXC1 1216 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 RALYLQ86SE5 291 aaKnown RBP16.26■□□□□ 0.19
VARS-225ENST00000482996 MAP4K1Q92918 833 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 PLXNA1Q9UIW2 1896 aa16.26■□□□□ 0.19
VARS-225ENST00000482996 DNM1LO00429 736 aa16.25■□□□□ 0.19
VARS-225ENST00000482996 RARBP10826 455 aa16.25■□□□□ 0.19
VARS-225ENST00000482996 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
VARS-225ENST00000482996 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
VARS-225ENST00000482996 A1CFQ9NQ94 594 aaKnown RBP16.25■□□□□ 0.19
VARS-225ENST00000482996 ERICH2A1L162 156 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
VARS-225ENST00000482996 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
VARS-225ENST00000482996 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 COL6A1P12109 1028 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 AKR1A1P14550 325 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
VARS-225ENST00000482996 NSMFQ6X4W1 530 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 FAM133AQ8N9E0 248 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 NCOA7Q8NI08 942 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 ESYT1Q9BSJ8 1104 aa16.24■□□□□ 0.19
VARS-225ENST00000482996 ZHX1Q9UKY1 873 aaPredicted RBP16.24■□□□□ 0.19
VARS-225ENST00000482996 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
VARS-225ENST00000482996 ASB14A6NK59 587 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 E7EWF7 191 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 ZNF865P0CJ78 1059 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 TAL1P17542 331 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 CNTN2Q02246 1040 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 MUM1L1Q5H9M0 696 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 GJC2Q5T442 439 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 CYB5R4Q7L1T6 521 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 SENP6Q9GZR1 1112 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 ABHD16BQ9H3Z7 469 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.23■□□□□ 0.19
VARS-225ENST00000482996 FAM184BQ9ULE4 1060 aa16.23■□□□□ 0.19
VARS-225ENST00000482996 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 FRMPD3Q5JV73 1810 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 IFIT3O14879 490 aaKnown RBP16.22■□□□□ 0.19
VARS-225ENST00000482996 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 SEC23AQ15436 765 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 ARMCX2Q7L311 632 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 SKAP1Q86WV1 359 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 FGD4Q96M96 766 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 UBA5Q9GZZ9 404 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
VARS-225ENST00000482996 CYP39A1Q9NYL5 469 aa16.22■□□□□ 0.19
VARS-225ENST00000482996 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
VARS-225ENST00000482996 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
VARS-225ENST00000482996 LRRC41Q15345 812 aa16.21■□□□□ 0.19
VARS-225ENST00000482996 RNF180Q86T96 592 aa16.21■□□□□ 0.19
VARS-225ENST00000482996 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
VARS-225ENST00000482996 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
VARS-225ENST00000482996 ADD3Q9UEY8 706 aaKnown RBP16.21■□□□□ 0.19
VARS-225ENST00000482996 PTPDC1A2A3K4 754 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms