RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 SLC16A2P36021 539 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-213ENST00000482192 ZNF543Q08ER8 600 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 TRDNQ13061 729 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 BMP2KLQ5H9B9 411 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 GPATCH4Q5T3I0 446 aaKnown RBP13.95□□□□□ -0.18
HMGN1-213ENST00000482192 SYDE2Q5VT97 1194 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 TTBK2Q6IQ55 1244 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-213ENST00000482192 ENAHQ8N8S7 591 aaPredicted RBP13.95□□□□□ -0.18
HMGN1-213ENST00000482192 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 ANKS1AQ92625 1134 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 CCDC136Q96JN2 1154 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 AGBL1Q96MI9 1066 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 RANBP17Q9H2T7 1088 aaKnown RBP13.95□□□□□ -0.18
HMGN1-213ENST00000482192 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
HMGN1-213ENST00000482192 CYP21A2P08686 494 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 ALAS1P13196 640 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 SNAP25P60880 206 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 CCPG1Q9ULG6 757 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 CNPY2Q9Y2B0 182 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 NR2E3Q9Y5X4 410 aa13.94□□□□□ -0.18
HMGN1-213ENST00000482192 PFASO15067 1338 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 SYNGAP1Q96PV0 1343 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 H0YGN5 161 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 EVI5O60447 810 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 NEFLP07196 543 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 COL6A1P12109 1028 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 MAMDC4Q6UXC1 1216 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 RALYLQ86SE5 291 aaKnown RBP13.93□□□□□ -0.18
HMGN1-213ENST00000482192 MAP4K1Q92918 833 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
HMGN1-213ENST00000482192 PNMA2Q9UL42 364 aa13.93□□□□□ -0.18
HMGN1-213ENST00000482192 DNM1LO00429 736 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 ASPRV1Q53RT3 343 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
HMGN1-213ENST00000482192 SKAP1Q86WV1 359 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 NCOA7Q8NI08 942 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 ESYT1Q9BSJ8 1104 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 PDE4DIPQ5VU43 2346 aa13.92□□□□□ -0.18
HMGN1-213ENST00000482192 E7EWF7 191 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 ZNF865P0CJ78 1059 aaPredicted RBP13.91□□□□□ -0.18
HMGN1-213ENST00000482192 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 RARBP10826 455 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 AKR1A1P14550 325 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 MUM1L1Q5H9M0 696 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 CYB5R4Q7L1T6 521 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 RBM8AQ9Y5S9 174 aaKnown RBP13.91□□□□□ -0.18
HMGN1-213ENST00000482192 FRMPD3Q5JV73 1810 aa13.91□□□□□ -0.18
HMGN1-213ENST00000482192 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 ERICH2A1L162 156 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 SART3Q15020 963 aaKnown RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 SEC23AQ15436 765 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 ANO1Q5XXA6 986 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 FGD4Q96M96 766 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 XPNPEP3Q9NQH7 507 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.9□□□□□ -0.18
HMGN1-213ENST00000482192 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 PLXNA1Q9UIW2 1896 aa13.9□□□□□ -0.18
HMGN1-213ENST00000482192 ASB14A6NK59 587 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 IFIT3O14879 490 aaKnown RBP13.89□□□□□ -0.19
HMGN1-213ENST00000482192 CNTN2Q02246 1040 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 GJC2Q5T442 439 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-213ENST00000482192 NSMFQ6X4W1 530 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 STOX1Q6ZVD7 989 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 ARMCX2Q7L311 632 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 C7orf61Q8IZ16 206 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 ABHD16BQ9H3Z7 469 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 ANO2Q9NQ90 1003 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 ZHX1Q9UKY1 873 aaPredicted RBP13.89□□□□□ -0.19
HMGN1-213ENST00000482192 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 TAF6LQ9Y6J9 622 aa13.89□□□□□ -0.19
HMGN1-213ENST00000482192 SOWAHBA6NEL2 793 aa13.88□□□□□ -0.19
HMGN1-213ENST00000482192 NFIBO00712 420 aa13.88□□□□□ -0.19
HMGN1-213ENST00000482192 CDC45O75419 566 aa13.88□□□□□ -0.19
HMGN1-213ENST00000482192 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-213ENST00000482192 ACVR2BQ13705 512 aa13.88□□□□□ -0.19
HMGN1-213ENST00000482192 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-213ENST00000482192 SENP6Q9GZR1 1112 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-213ENST00000482192 CPVLQ9H3G5 476 aa13.88□□□□□ -0.19
HMGN1-213ENST00000482192 ZNFX1Q9P2E3 1918 aaKnown RBP13.88□□□□□ -0.19
HMGN1-213ENST00000482192 MKI67P46013 3256 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms