RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SYPP08247 313 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 PABPC1P11940 636 aaKnown RBP8.46□□□□□ -1.06
SF3B1-210ENST00000482158 IFNGR1P15260 489 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 HSD3B2P26439 372 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 GFRA1P56159 465 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 AMPD2Q01433 879 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 POU4F1Q01851 419 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 RTP2Q5QGT7 225 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
SF3B1-210ENST00000482158 C1orf159Q96HA4 380 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 SLC26A8Q96RN1 970 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 IER2Q9BTL4 223 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 ZNF281Q9Y2X9 895 aa8.46□□□□□ -1.06
SF3B1-210ENST00000482158 TMEM82A0PJX8 343 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 AURKAO14965 403 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 COBLO75128 1261 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 SCG5P05408 212 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 CD3EP07766 207 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 TEKQ02763 1124 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 TKFCQ3LXA3 575 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 PLEKHG4Q58EX7 1191 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 ZC3H12BQ5HYM0 836 aaKnown RBP8.45□□□□□ -1.06
SF3B1-210ENST00000482158 CWF19L1Q69YN2 538 aaKnown RBP8.45□□□□□ -1.06
SF3B1-210ENST00000482158 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
SF3B1-210ENST00000482158 NFXL1Q6ZNB6 911 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 HOMER1Q86YM7 354 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 CREG2Q8IUH2 290 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 ASB11Q8WXH4 323 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 APPBP2Q92624 585 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 COPS5Q92905 334 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
SF3B1-210ENST00000482158 TCFL5Q9UL49 500 aa8.45□□□□□ -1.06
SF3B1-210ENST00000482158 TRBV23-1A0A0A0MS06 115 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 STXBP3O00186 592 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 CDC45O75419 566 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 PRNPP04156 253 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 HOXC12P31275 282 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 GRIK1P39086 918 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 CD97P48960 835 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 PCBP3P57721 371 aaKnown RBP8.44□□□□□ -1.06
SF3B1-210ENST00000482158 SCRN1Q12765 414 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 PRSS53Q2L4Q9 553 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 DENND5AQ6IQ26 1287 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 NSMFQ6X4W1 530 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 RNF111Q6ZNA4 994 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 ZNF662Q6ZS27 426 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 SPRED2Q7Z698 418 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 DTX1Q86Y01 620 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 SCUBE1Q8IWY4 988 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 TMEM145Q8NBT3 493 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 KREMEN2Q8NCW0 462 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 MISP3Q96FF7 219 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 DHRS4Q9BTZ2 278 aa8.44□□□□□ -1.06
SF3B1-210ENST00000482158 CWC22Q9HCG8 908 aaKnown RBP8.44□□□□□ -1.06
SF3B1-210ENST00000482158 MRPS23Q9Y3D9 190 aaKnown RBP8.44□□□□□ -1.06
SF3B1-210ENST00000482158 ARNTLO00327 626 aa8.43□□□□□ -1.06
SF3B1-210ENST00000482158 PPP1R12AO14974 1030 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-210ENST00000482158 SPINK2P20155 84 aa8.43□□□□□ -1.06
SF3B1-210ENST00000482158 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
SF3B1-210ENST00000482158 ZPBP2Q6X784 338 aa8.43□□□□□ -1.06
SF3B1-210ENST00000482158 KIAA0907Q7Z7F0 614 aaPredicted RBP8.43□□□□□ -1.06
SF3B1-210ENST00000482158 C2orf71A6NGG8 1288 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 KIAA1324LA8MWY0 1029 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-210ENST00000482158 SNRPB2P08579 225 aaKnown RBP8.42□□□□□ -1.06
SF3B1-210ENST00000482158 CD8BP10966 210 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 LTKP29376 864 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 SSTR4P31391 388 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 NOP2P46087 812 aaKnown RBP8.42□□□□□ -1.06
SF3B1-210ENST00000482158 CEBPAP49715 358 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-210ENST00000482158 EGR3Q06889 387 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 MAP4K2Q12851 820 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 NTRK3Q16288 839 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
SF3B1-210ENST00000482158 C16orf86Q6ZW13 317 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 FRS2Q8WU20 508 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 CCDC140Q96MF4 163 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 CDC6Q99741 560 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 GPRC5CQ9NQ84 441 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 AP5S1Q9NUS5 200 aa8.42□□□□□ -1.06
SF3B1-210ENST00000482158 SBNO2Q9Y2G9 1366 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 BLACEA4D250 179 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 FKTNO75072 461 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 ADAM23O75077 832 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 ASMTLO95671 621 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 THBDP07204 575 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 GSTM1P09488 218 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 C6orf222P0C671 652 aaPredicted RBP8.41□□□□□ -1.06
SF3B1-210ENST00000482158 ECI1P42126 302 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 CBX2Q14781 532 aaPredicted RBP8.41□□□□□ -1.06
SF3B1-210ENST00000482158 RCSD1Q6JBY9 416 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 NPLOC4Q8TAT6 608 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 BACE2Q9Y5Z0 518 aa8.41□□□□□ -1.06
SF3B1-210ENST00000482158 CCDC163A0A0D9SF12 145 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 FGF10O15520 208 aaPredicted RBP8.4□□□□□ -1.06
SF3B1-210ENST00000482158 ADAMTS4O75173 837 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 IKZF1Q13422 519 aa8.4□□□□□ -1.06
SF3B1-210ENST00000482158 STK11IPQ8N1F8 1099 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms