RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SMAP1Q8IYB5 467 aaPredicted RBP13.42□□□□□ -0.26
HPS4-212ENST00000481910 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 PNMA3Q9UL41 463 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 PRR12Q9ULL5 1215 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 SLC45A1Q9Y2W3 748 aa13.42□□□□□ -0.26
HPS4-212ENST00000481910 IGF2BP3O00425 579 aaKnown RBP eCLIP13.41□□□□□ -0.26
HPS4-212ENST00000481910 CYTH3O43739 400 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 DSG3P32926 999 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 MAP2K2P36507 400 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 ST3GAL1Q11201 340 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 BECN1Q14457 450 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 NTRK3Q16288 839 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 UTP14CQ5TAP6 766 aaKnown RBP13.41□□□□□ -0.26
HPS4-212ENST00000481910 REM2Q8IYK8 340 aaPredicted RBP13.41□□□□□ -0.26
HPS4-212ENST00000481910 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
HPS4-212ENST00000481910 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 TMEM51Q9NW97 253 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 PPP1R9AQ9ULJ8 1098 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 CDKL5O76039 1030 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 CYP2C8P10632 490 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 IFNAR1P17181 557 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 SLC35G1Q2M3R5 365 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 PHKBQ93100 1093 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 SPZ1Q9BXG8 430 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 JMJD4Q9H9V9 463 aa13.41□□□□□ -0.26
HPS4-212ENST00000481910 V9GY48 417 aaPredicted RBP13.41□□□□□ -0.26
HPS4-212ENST00000481910 DTNBO60941 627 aa13.4□□□□□ -0.26
HPS4-212ENST00000481910 FUT2Q10981 343 aa13.4□□□□□ -0.26
HPS4-212ENST00000481910 HOMER1Q86YM7 354 aa13.4□□□□□ -0.26
HPS4-212ENST00000481910 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
HPS4-212ENST00000481910 ATG4CQ96DT6 458 aa13.4□□□□□ -0.26
HPS4-212ENST00000481910 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
HPS4-212ENST00000481910 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
HPS4-212ENST00000481910 PARP14Q460N5 1801 aa13.4□□□□□ -0.26
HPS4-212ENST00000481910 RLFQ13129 1914 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 hCG_1642624A0A1W2PR95 340 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 VWA5AO00534 786 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 CTDNEP1O95476 244 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 SNAP25P60880 206 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 HERVK_113P62684 666 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 ZNF830Q96NB3 372 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 PIGSQ96S52 555 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 PARK7Q99497 189 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 MYPNQ86TC9 1320 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 CNTNAP5Q8WYK1 1306 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 PRPF3O43395 683 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 ZBED4O75132 1171 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 FDX1P10109 184 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 CUL4AQ13619 759 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 CDC37Q16543 378 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 TAF3Q5VWG9 929 aa13.39□□□□□ -0.27
HPS4-212ENST00000481910 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
HPS4-212ENST00000481910 MYH6P13533 1939 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 PTPDC1A2A3K4 754 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 ZBTB5O15062 677 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
HPS4-212ENST00000481910 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 CCDC174Q6PII3 467 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 CPXCR1Q8N123 301 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 RANBP17Q9H2T7 1088 aaKnown RBP13.38□□□□□ -0.27
HPS4-212ENST00000481910 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
HPS4-212ENST00000481910 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 JAK2O60674 1132 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 LBX2Q6XYB7 198 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 CEP120Q8N960 986 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 PAGR1Q9BTK6 254 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 GCLCP48506 637 aaPredicted RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 PLS1Q14651 629 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 POTEEQ6S8J3 1075 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 INTS4Q96HW7 963 aaKnown RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 RAVER2Q9HCJ3 691 aaKnown RBP13.37□□□□□ -0.27
HPS4-212ENST00000481910 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
HPS4-212ENST00000481910 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
HPS4-212ENST00000481910 PEX10O60683 326 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 DEXIO95424 95 aa13.36□□□□□ -0.27
HPS4-212ENST00000481910 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
HPS4-212ENST00000481910 SLC4A3P48751 1232 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms