RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 RBAK-RBAKDNI3L0D1 243 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 CLEC3AO75596 197 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 NME1P15531 152 aaKnown RBP5.91□□□□□ -1.46
COPA-204ENST00000481522 CCNFP41002 786 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 EGR3Q06889 387 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 SNX17Q15036 470 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 ASCC2Q9H1I8 757 aaPredicted RBP5.91□□□□□ -1.46
COPA-204ENST00000481522 ANTXR1Q9H6X2 564 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 IGSF5Q9NSI5 407 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 PPT2Q9UMR5 302 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 INPP5FQ9Y2H2 1132 aa5.91□□□□□ -1.46
COPA-204ENST00000481522 UBOX5O94941 541 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 SPPL2CQ8IUH8 684 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 SYTL4Q96C24 671 aaPredicted RBP5.9□□□□□ -1.46
COPA-204ENST00000481522 CRBNQ96SW2 442 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 MKRN2Q9H000 416 aaKnown RBP5.9□□□□□ -1.46
COPA-204ENST00000481522 EFR3BQ9Y2G0 817 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 IRAK3Q9Y616 596 aa5.9□□□□□ -1.46
COPA-204ENST00000481522 TNFRSF10CO14798 259 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 PI3P19957 117 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 LTKP29376 864 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 GJA8P48165 433 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 CCDC81Q6ZN84 652 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 RASGRP4Q8TDF6 673 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 SIGLEC10Q96LC7 697 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 SLC6A18Q96N87 628 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 TM9SF2Q99805 663 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 GPR62Q9BZJ7 368 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 ACBD3Q9H3P7 528 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 GINM1Q9NU53 330 aa5.89□□□□□ -1.47
COPA-204ENST00000481522 FAM86C2PA6NEL3 165 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 LRRN2O75325 713 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 SOX9P48436 509 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 AFF3P51826 1226 aaKnown RBP5.88□□□□□ -1.47
COPA-204ENST00000481522 CHRNEQ04844 493 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
COPA-204ENST00000481522 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
COPA-204ENST00000481522 OR14I1A6ND48 311 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 EIF6P56537 245 aaKnown RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 NMIQ13287 307 aaPredicted RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 GNL2Q13823 731 aaKnown RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 TSPYL5Q86VY4 417 aaPredicted RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 TAB3Q8N5C8 712 aaPredicted RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 CPLX3Q8WVH0 158 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 ZNF512BQ96KM6 892 aaPredicted RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 DHRS1Q96LJ7 313 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 SLC9A7Q96T83 725 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 CNOT11Q9UKZ1 510 aaKnown RBP5.87□□□□□ -1.47
COPA-204ENST00000481522 PALD1Q9ULE6 856 aa5.87□□□□□ -1.47
COPA-204ENST00000481522 GUCY2CP25092 1073 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 NASPP49321 788 aaPredicted RBP5.86□□□□□ -1.47
COPA-204ENST00000481522 NBPF12Q5TAG4 269 aaPredicted RBP5.86□□□□□ -1.47
COPA-204ENST00000481522 INTS3Q68E01 1043 aaKnown RBP5.86□□□□□ -1.47
COPA-204ENST00000481522 FRMD5Q7Z6J6 570 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 SP8Q8IXZ3 490 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 TMEM192Q8IY95 271 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 ANKS4BQ8N8V4 417 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 RBBP8NLQ8NC74 664 aaPredicted RBP5.86□□□□□ -1.47
COPA-204ENST00000481522 OR6P1Q8NGX9 317 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 SRRTQ9BXP5 876 aaKnown RBP5.86□□□□□ -1.47
COPA-204ENST00000481522 PCDHA11Q9Y5I1 949 aa5.86□□□□□ -1.47
COPA-204ENST00000481522 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 ACRP10323 421 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 DUSP4Q13115 394 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 RTP5Q14D33 572 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 SHISA4Q96DD7 197 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 VWCEQ96DN2 955 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 SEC16BQ96JE7 1060 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 SUCOQ9UBS9 1254 aaKnown RBP5.85□□□□□ -1.47
COPA-204ENST00000481522 MBD1Q9UIS9 605 aaPredicted RBP5.85□□□□□ -1.47
COPA-204ENST00000481522 STRIP2Q9ULQ0 834 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 PCDHB12Q9Y5F1 795 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 SLC12A7Q9Y666 1083 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 SETD1AO15047 1707 aaKnown RBP5.85□□□□□ -1.47
COPA-204ENST00000481522 KIF21AQ7Z4S6 1674 aa5.85□□□□□ -1.47
COPA-204ENST00000481522 HRKO00198 91 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 PRICKLE3O43900 615 aaPredicted RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 ZC3H6P61129 1189 aaKnown RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 SRSF3P84103 164 aaKnown RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 NBPF9Q3BBW0 867 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 VPS37DQ86XT2 251 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 CCDC144CPQ8IYA2 1237 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 ENOX1Q8TC92 643 aaKnown RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 SYTL5Q8TDW5 730 aaPredicted RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 SMARCC1Q92922 1105 aaPredicted RBP5.84□□□□□ -1.47
COPA-204ENST00000481522 SIRT5Q9NXA8 310 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 FBXL21Q9UKT6 434 aa5.84□□□□□ -1.47
COPA-204ENST00000481522 SSU72P8A0A1W2PR75 194 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 MAGEA10P43363 369 aaPredicted RBP5.83□□□□□ -1.48
COPA-204ENST00000481522 PMS1P54277 932 aaKnown RBP5.83□□□□□ -1.48
COPA-204ENST00000481522 ADAM17P78536 824 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 ZNF827Q17R98 1081 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 BBS9Q3SYG4 887 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 ADGRF1Q5T601 910 aa5.83□□□□□ -1.48
COPA-204ENST00000481522 TDRD10Q5VZ19 366 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms