RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 DKC1O60832 514 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 CC2D1AQ6P1N0 951 aaPredicted RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 RSBN1LQ6PCB5 846 aaPredicted RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 RAB44Q7Z6P3 723 aaPredicted RBP12.67□□□□□ -0.38
TRIM27-205ENST00000481474 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 NLRC4Q9NPP4 1024 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 SNAP25P60880 206 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 NLRP4Q96MN2 994 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 SENP1Q9P0U3 644 aa12.67□□□□□ -0.38
TRIM27-205ENST00000481474 PPFIA4O75335 1185 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 IGFBP4P22692 258 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 TBC1D8BQ0IIM8 1120 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 BLZF1Q9H2G9 400 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 MAP3K13O43283 966 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 KRT83P78385 493 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 GOLGA8SH3BPF8 625 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 ERFEQ4G0M1 354 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 C2orf69Q8N8R5 385 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 BHMTQ93088 406 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 OSBPL10Q9BXB5 764 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 ORC6Q9Y5N6 252 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 IRF1P10914 325 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 NSD3Q9BZ95 1437 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 FYCO1Q9BQS8 1478 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 GPC4O75487 556 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 GSDMDP57764 484 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 LGSNQ5TDP6 509 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 FBXO11Q86XK2 927 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
TRIM27-205ENST00000481474 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 LBRQ14739 615 aaKnown RBP12.66□□□□□ -0.38
TRIM27-205ENST00000481474 TOMM20Q15388 145 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 ZFYVE1Q9HBF4 777 aa12.66□□□□□ -0.38
TRIM27-205ENST00000481474 SPTLC1O15269 473 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 EHHADHQ08426 723 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 NUDCD3Q8IVD9 361 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 CEP19Q96LK0 163 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 RAB20Q9NX57 234 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 RTL1A6NKG5 1358 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 TIMM10P62072 90 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ITPRIPL1Q6GPH6 555 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 KDELC2Q7Z4H8 507 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ZSCAN30Q86W11 494 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 CCDC13Q8IYE1 715 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 SGK1O00141 431 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ITGA6P23229 1130 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 POLR2BP30876 1174 aaKnown RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 GBP1P32455 592 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 VAV2P52735 878 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 HAUS3Q68CZ6 603 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 LEMD2Q8NC56 503 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■■□□ 18.3
TRIM27-205ENST00000481474 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 TRPA1O75762 1119 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ATXN3P54252 364 aaPredicted RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 TFAMQ00059 246 aaKnown RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 THOC5Q13769 683 aaKnown RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 ANKRD20A3Q5VUR7 823 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 NCLNQ969V3 563 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 CCDC138Q96M89 665 aa12.65□□□□□ -0.38
TRIM27-205ENST00000481474 LUC7L2Q9Y383 392 aaKnown RBP12.65□□□□□ -0.38
TRIM27-205ENST00000481474 NNMTP40261 264 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 CYP4A11Q02928 519 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 MECOMQ03112 1051 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 NMIQ13287 307 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-205ENST00000481474 LVRNQ6Q4G3 990 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 FBXL13Q8NEE6 735 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 IFT122Q9HBG6 1241 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 NAA35Q5VZE5 725 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 U2AF1L4Q8WU68 220 aaKnown RBP12.64□□□□□ -0.39
TRIM27-205ENST00000481474 EEF2KMTQ96G04 330 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 POC1B-GALNT4F8VUJ3 575 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 ZNF263O14978 683 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 EVI5O60447 810 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 F13A1P00488 732 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 RAPGEF5Q92565 580 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 DMAP1Q9NPF5 467 aaPredicted RBP12.64□□□□□ -0.39
TRIM27-205ENST00000481474 MBIPQ9NS73 344 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 DNAJC6O75061 913 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 SNX1Q13596 522 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 KHDRBS2Q5VWX1 349 aaKnown RBP12.64□□□□□ -0.39
TRIM27-205ENST00000481474 PPM1KQ8N3J5 372 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 IFNKQ9P0W0 207 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 A0A1B0GVL5 298 aa12.64□□□□□ -0.39
TRIM27-205ENST00000481474 KRT10P13645 584 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms