RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
SQSTM1-207ENST00000481335 ADAMTS4O75173 837 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 DUSP11O75319 330 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 MCCP23508 829 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 CST5P28325 142 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 ADCYAP1R1P41586 468 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 NMIQ13287 307 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 NUP133Q8WUM0 1156 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 YTHDC1Q96MU7 727 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 RNF146Q9NTX7 359 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 ZNF536O15090 1300 aa14.32□□□□□ -0.12
SQSTM1-207ENST00000481335 LCTP09848 1927 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 LOC102724159A0A0B4J2E5 919 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 ASB14A6NK59 587 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 SOX1O00570 391 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 TAL1P17542 331 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 SDSP20132 328 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 ACVR2BQ13705 512 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 PWP2Q15269 919 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 AKNAD1Q5T1N1 836 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 BTNL9Q6UXG8 535 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 MFSD6Q6ZSS7 791 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 ARMCX2Q7L311 632 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 FGD4Q96M96 766 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 SPC25Q9HBM1 224 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 A1CFQ9NQ94 594 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 TOMM22Q9NS69 142 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 LAMA2P24043 3122 aaKnown RBP14.31□□□□□ -0.12
SQSTM1-207ENST00000481335 A0A1W2PQ45 241 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 A0A1W2PQY0 241 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 POTEB2H3BUK9 544 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 NMT2O60551 498 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 PGK1P00558 417 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 ICAM1P05362 532 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 NKX3-2P78367 333 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 MDM2Q00987 491 aaPredicted RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 TRIM60Q495X7 471 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 PCSK9Q8NBP7 692 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 KLHDC9Q8NEP7 349 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 LRCH3Q96II8 777 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 TOX2Q96NM4 488 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 TRERF1Q96PN7 1200 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 UPF3AQ9H1J1 476 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 RANBP17Q9H2T7 1088 aaKnown RBP14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 PDLIM7Q9NR12 457 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 TACC3Q9Y6A5 838 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 MROH7Q68CQ1 1323 aa14.3□□□□□ -0.12
SQSTM1-207ENST00000481335 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 GJA9P57773 515 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 CCDC96Q2M329 555 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 B4GALNT3Q6L9W6 998 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 ESR2Q92731 530 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 TMEM47Q9BQJ4 181 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 MAF1Q9H063 256 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 HOMER2Q9NSB8 354 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 ELP1O95163 1332 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 COL6A3P12111 3177 aa14.29□□□□□ -0.12
SQSTM1-207ENST00000481335 ZNF213O14771 459 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 IGHDP01880 384 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 CLTBP09497 229 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 ALAS1P13196 640 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 MYH6P13533 1939 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 ACLYP53396 1101 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 CCDC144BQ3MJ40 725 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 RRP12Q5JTH9 1297 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 GPATCH4Q5T3I0 446 aaKnown RBP14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 CCSAPQ6IQ19 270 aaPredicted RBP14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 ANKRD33Q7Z3H0 272 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 DGKHQ86XP1 1220 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 CCDC144CPQ8IYA2 1237 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 WDR19Q8NEZ3 1342 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 FERMT2Q96AC1 680 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 GLT1D1Q96MS3 346 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 DSCC1Q9BVC3 393 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 KATNBL1Q9H079 304 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 INCENPQ9NQS7 918 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 STARD7Q9NQZ5 370 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 CCPG1Q9ULG6 757 aa14.28□□□□□ -0.12
SQSTM1-207ENST00000481335 PDHBP11177 359 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 TLE2Q04725 743 aa14.27□□□□□ -0.13
SQSTM1-207ENST00000481335 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms