RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 TCFL5Q9UL49 500 aa6.69□□□□□ -1.34
CHCHD3-205ENST00000481152 GCC2Q8IWJ2 1684 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 POLR1AO95602 1720 aaPredicted RBP6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 HECW1Q76N89 1606 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 FGD6Q6ZV73 1430 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 CCDC18Q5T9S5 1454 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 HDLBPQ00341 1268 aaKnown RBP6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 CHRNEQ04844 493 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 BBS9Q3SYG4 887 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 WAPLQ7Z5K2 1190 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 SPPL2CQ8IUH8 684 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 BHLHE22Q8NFJ8 381 aaPredicted RBP6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 CHST7Q9NS84 486 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 MINPP1Q9UNW1 487 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 PCDHB12Q9Y5F1 795 aa6.68□□□□□ -1.34
CHCHD3-205ENST00000481152 SNAPC4Q5SXM2 1469 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 SUPT6HQ7KZ85 1726 aaKnown RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 ARHGEF11O15085 1522 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 SSU72P8A0A1W2PR75 194 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 TMEM82A0PJX8 343 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 BTBD11A6QL63 1104 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 FKTNO75072 461 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 SYPP08247 313 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 IRX6P78412 446 aaPredicted RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 AUHQ13825 339 aaKnown RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 COL9A2Q14055 689 aaPredicted RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 NT5DC4Q86YG4 428 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 RBBP8NLQ8NC74 664 aaPredicted RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 FBXO15Q8NCQ5 510 aaPredicted RBP6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 EPB41L4BQ9H329 900 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 GFOD1Q9NXC2 390 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 ZMYM5Q9UJ78 669 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 FBXL21Q9UKT6 434 aa6.67□□□□□ -1.34
CHCHD3-205ENST00000481152 EHBP1L1Q8N3D4 1523 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 KDM5BQ9UGL1 1544 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 C9IYK1 514 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 ANP32CO43423 234 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 RAB11FIP3O75154 756 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 GUCY2CP25092 1073 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 PMS1P54277 932 aaKnown RBP6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 FZD5Q13467 585 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 C9orf131Q5VYM1 1079 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 TDRD10Q5VZ19 366 aaKnown RBP6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 SYDE1Q6ZW31 735 aaPredicted RBP6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 LSRQ86X29 649 aaPredicted RBP6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 MAP6Q96JE9 813 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 PPP1R16BQ96T49 567 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 DCP1AQ9NPI6 582 aaPredicted RBP6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 GPR160Q9UJ42 338 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 FANCIQ9NVI1 1328 aa6.66□□□□□ -1.34
CHCHD3-205ENST00000481152 NCOA2Q15596 1464 aa6.65□□□□□ -1.34
CHCHD3-205ENST00000481152 ABCA5Q8WWZ7 1642 aa6.65□□□□□ -1.34
CHCHD3-205ENST00000481152 DBX1A6NMT0 343 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 MEIS1O00470 390 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 SHOXO15266 292 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 USP2O75604 605 aaPredicted RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 TSPAN15O95858 294 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 ERCC5P28715 1186 aaPredicted RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 SOX9P48436 509 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 SNX17Q15036 470 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 ZYXQ15942 572 aaKnown RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 CCDC81Q6ZN84 652 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 RUFY4Q6ZNE9 571 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 CCDC144CPQ8IYA2 1237 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 C7orf61Q8IZ16 206 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 GPRASP2Q96D09 838 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 SLC6A17Q9H1V8 727 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 MYH16Q9H6N6 1097 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 KCNK12Q9HB15 430 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 PRR13Q9NZ81 148 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 EFR3BQ9Y2G0 817 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 YBX2Q9Y2T7 364 aaKnown RBP6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.35
CHCHD3-205ENST00000481152 TCOF1Q13428 1488 aaKnown RBP6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 PSPNO60542 156 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 CTSKP43235 329 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 KIR2DL1P43626 348 aaPredicted RBP6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 KIR2DL2P43627 348 aaPredicted RBP6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 ZPBP2Q6X784 338 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 UNC5AQ6ZN44 842 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 IRF2BP1Q8IU81 584 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 RASGRP4Q8TDF6 673 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 SMARCC1Q92922 1105 aaPredicted RBP6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 SHISA4Q96DD7 197 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 HHIPL1Q96JK4 782 aa6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 TMA7Q9Y2S6 64 aaKnown RBP6.64□□□□□ -1.35
CHCHD3-205ENST00000481152 LRRIQ1Q96JM4 1722 aa6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 TPD52L2O43399 206 aaKnown RBP6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 BMP8BP34820 402 aa6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 GJA8P48165 433 aa6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
CHCHD3-205ENST00000481152 CRTC3Q6UUV7 619 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms