RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CCDC163A0A0D9SF12 145 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 BLACEA4D250 179 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 TGFB1P01137 390 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 SCG5P05408 212 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 GSNP06396 782 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 CEACAM5P06731 702 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
UPF3A-207ENST00000481131 AMPD2Q01433 879 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 NTRK3Q16288 839 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 PRSS53Q2L4Q9 553 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 DENND5AQ6IQ26 1287 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 ZDHHC13Q8IUH4 622 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 ZNF655Q8N720 491 aaPredicted RBP7.5□□□□□ -1.21
UPF3A-207ENST00000481131 TMEM145Q8NBT3 493 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 HSPA12BQ96MM6 686 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 METTL22Q9BUU2 404 aaPredicted RBP7.5□□□□□ -1.21
UPF3A-207ENST00000481131 ASCC2Q9H1I8 757 aaPredicted RBP7.5□□□□□ -1.21
UPF3A-207ENST00000481131 SLKQ9H2G2 1235 aaPredicted RBP7.5□□□□□ -1.21
UPF3A-207ENST00000481131 MKNK2Q9HBH9 465 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 IFT57Q9NWB7 429 aa7.5□□□□□ -1.21
UPF3A-207ENST00000481131 PRR19A6NJB7 356 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 SNRPB2P08579 225 aaKnown RBP7.49□□□□□ -1.21
UPF3A-207ENST00000481131 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
UPF3A-207ENST00000481131 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.21
UPF3A-207ENST00000481131 CLEC16AQ2KHT3 1053 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 GAB4Q2WGN9 574 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 SLC35F1Q5T1Q4 408 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 FILIP1Q7Z7B0 1213 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 TSPYL5Q86VY4 417 aaPredicted RBP7.49□□□□□ -1.21
UPF3A-207ENST00000481131 PLD6Q8N2A8 252 aaKnown RBP7.49□□□□□ -1.21
UPF3A-207ENST00000481131 KRTAP4-12Q9BQ66 201 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 SEMA3GQ9NS98 782 aa7.49□□□□□ -1.21
UPF3A-207ENST00000481131 H3BS24 57 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 STXBP3O00186 592 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 PLD2O14939 933 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 GSC2O15499 205 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 RFPL3O75679 317 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 CD3EP07766 207 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 IFNGR1P15260 489 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 HOXC12P31275 282 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 SSTR4P31391 388 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 MASP1P48740 699 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 MAP4K2Q12851 820 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 CPSF6Q16630 551 aaKnown RBP eCLIP7.48□□□□□ -1.212e-7■■■□□ 16.2
UPF3A-207ENST00000481131 RNF187Q5TA31 235 aaPredicted RBP7.48□□□□□ -1.21
UPF3A-207ENST00000481131 USHBP1Q8N6Y0 703 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 KREMEN2Q8NCW0 462 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 NINJ1Q92982 152 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 FCRL3Q96P31 734 aaPredicted RBP7.48□□□□□ -1.21
UPF3A-207ENST00000481131 SLC12A9Q9BXP2 914 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 GPATCH2Q9NW75 528 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 PLAAQ9Y263 795 aa7.48□□□□□ -1.21
UPF3A-207ENST00000481131 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 ARNTLO00327 626 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 AURKAO14965 403 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 DNAJC6O75061 913 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 VAV1P15498 845 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 BMP8BP34820 402 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 ECI1P42126 302 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 KCNJ6P48051 423 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 CLCN7P51798 805 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 POU4F1Q01851 419 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 SCRN1Q12765 414 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
UPF3A-207ENST00000481131 KCTD13Q8WZ19 329 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 COPS5Q92905 334 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 IPO9Q96P70 1041 aaKnown RBP7.47□□□□□ -1.21
UPF3A-207ENST00000481131 MRPL4Q9BYD3 311 aaKnown RBP7.47□□□□□ -1.21
UPF3A-207ENST00000481131 TRIT1Q9H3H1 467 aaKnown RBP7.47□□□□□ -1.21
UPF3A-207ENST00000481131 SPC25Q9HBM1 224 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 PRKAB1Q9Y478 270 aa7.47□□□□□ -1.21
UPF3A-207ENST00000481131 IRS4O14654 1257 aaPredicted RBP7.46□□□□□ -1.22
UPF3A-207ENST00000481131 ZNF205O95201 554 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 TPP2P29144 1249 aaPredicted RBP7.46□□□□□ -1.22
UPF3A-207ENST00000481131 PTPROQ16827 1216 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 FNDC3BQ53EP0 1204 aaKnown RBP7.46□□□□□ -1.22
UPF3A-207ENST00000481131 TM4SF20Q53R12 229 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 TRIM61Q5EBN2 209 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 CWF19L1Q69YN2 538 aaKnown RBP7.46□□□□□ -1.22
UPF3A-207ENST00000481131 THAP5Q7Z6K1 395 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 NIM1KQ8IY84 436 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 NPLOC4Q8TAT6 608 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 SLC7A14Q8TBB6 771 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 FRS2Q8WU20 508 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 UBE2FQ969M7 185 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 TRIM39Q9HCM9 518 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 GPRC5CQ9NQ84 441 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 ZC3H7BQ9UGR2 993 aaKnown RBP7.46□□□□□ -1.22
UPF3A-207ENST00000481131 ABCC9O60706 1549 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 PITPNM2Q9BZ72 1349 aa7.46□□□□□ -1.22
UPF3A-207ENST00000481131 CYP26A1O43174 497 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 KCNQ2O43526 872 aa7.45□□□□□ -1.22
UPF3A-207ENST00000481131 THBDP07204 575 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms