RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 OGDHLQ9ULD0 1010 aa23.63■■□□□ 1.37
VPS36-204ENST00000480923 DIS3Q9Y2L1 958 aaKnown RBP23.63■■□□□ 1.37
VPS36-204ENST00000480923 SNHG28P0DPA3 235 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 ALAS1P13196 640 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 CYBAP13498 195 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 TKFCQ3LXA3 575 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 CYB5R4Q7L1T6 521 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 ANKLE1Q8NAG6 615 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 TRPV1Q8NER1 839 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 GTF3C3Q9Y5Q9 886 aa23.62■■□□□ 1.37
VPS36-204ENST00000480923 E7EWF7 191 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 GOLGA8HP0CJ92 632 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 GPATCH4Q5T3I0 446 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 IFIT1BQ5T764 474 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 LHX8Q68G74 356 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 CASC1Q6TDU7 716 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.61■■□□□ 1.37
VPS36-204ENST00000480923 NCOA7Q8NI08 942 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 PAWRQ96IZ0 340 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 HTATIP2Q9BUP3 242 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 LSG1Q9H089 658 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 RANBP17Q9H2T7 1088 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 ANO2Q9NQ90 1003 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 DDX20Q9UHI6 824 aaKnown RBP23.61■■□□□ 1.37
VPS36-204ENST00000480923 CCPG1Q9ULG6 757 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
VPS36-204ENST00000480923 PRAMEF19Q5SWL8 479 aa23.6■■□□□ 1.37
VPS36-204ENST00000480923 PRPF38BQ5VTL8 546 aaKnown RBP23.6■■□□□ 1.37
VPS36-204ENST00000480923 TRERF1Q96PN7 1200 aa23.6■■□□□ 1.37
VPS36-204ENST00000480923 TINF2Q9BSI4 451 aa23.6■■□□□ 1.37
VPS36-204ENST00000480923 MKI67P46013 3256 aaKnown RBP23.6■■□□□ 1.37
VPS36-204ENST00000480923 MSCO60682 206 aa23.59■■□□□ 1.37
VPS36-204ENST00000480923 ICAM1P05362 532 aa23.59■■□□□ 1.37
VPS36-204ENST00000480923 STOX1Q6ZVD7 989 aa23.59■■□□□ 1.37
VPS36-204ENST00000480923 NECAB2Q7Z6G3 386 aa23.59■■□□□ 1.37
VPS36-204ENST00000480923 DPF3Q92784 378 aa23.59■■□□□ 1.37
VPS36-204ENST00000480923 DNAJC25-GNG10A0A024R161 153 aa23.58■■□□□ 1.37
VPS36-204ENST00000480923 IFIT3O14879 490 aaKnown RBP23.58■■□□□ 1.37
VPS36-204ENST00000480923 CDC45O75419 566 aa23.58■■□□□ 1.37
VPS36-204ENST00000480923 TAL1P17542 331 aaPredicted RBP23.58■■□□□ 1.37
VPS36-204ENST00000480923 UBA5Q9GZZ9 404 aa23.58■■□□□ 1.37
VPS36-204ENST00000480923 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.37
VPS36-204ENST00000480923 ERICH2A1L162 156 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 SEPT4O43236 478 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 SEC23AQ15436 765 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 MUM1L1Q5H9M0 696 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 A1CFQ9NQ94 594 aaKnown RBP23.57■■□□□ 1.36
VPS36-204ENST00000480923 NRBP1Q9UHY1 535 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 CNPY2Q9Y2B0 182 aa23.57■■□□□ 1.36
VPS36-204ENST00000480923 POTEB2H3BUK9 544 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 PARP1P09874 1014 aaKnown RBP23.56■■□□□ 1.36
VPS36-204ENST00000480923 SART3Q15020 963 aaKnown RBP23.56■■□□□ 1.36
VPS36-204ENST00000480923 ASPRV1Q53RT3 343 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 ANO1Q5XXA6 986 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 MSL3Q8N5Y2 521 aaKnown RBP23.56■■□□□ 1.36
VPS36-204ENST00000480923 CPVLQ9H3G5 476 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 C11orf49Q9H6J7 331 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 PFASO15067 1338 aa23.56■■□□□ 1.36
VPS36-204ENST00000480923 SLC27A2O14975 620 aa23.55■■□□□ 1.36
VPS36-204ENST00000480923 MNX1P50219 401 aaPredicted RBP23.55■■□□□ 1.36
VPS36-204ENST00000480923 NSMFQ6X4W1 530 aa23.55■■□□□ 1.36
VPS36-204ENST00000480923 CHST3Q7LGC8 479 aa23.55■■□□□ 1.36
VPS36-204ENST00000480923 ZNF467Q7Z7K2 595 aaPredicted RBP23.55■■□□□ 1.36
VPS36-204ENST00000480923 DHX16O60231 1041 aaKnown RBP23.54■■□□□ 1.36
VPS36-204ENST00000480923 CNTN2Q02246 1040 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 WTAPQ15007 396 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 CREB3L3Q68CJ9 461 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 MAMDC4Q6UXC1 1216 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 MB21D2Q8IYB1 491 aaPredicted RBP23.54■■□□□ 1.36
VPS36-204ENST00000480923 PNMA2Q9UL42 364 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 SYNGAP1Q96PV0 1343 aa23.54■■□□□ 1.36
VPS36-204ENST00000480923 TMEM67Q5HYA8 995 aa23.53■■□□□ 1.36
VPS36-204ENST00000480923 FGD4Q96M96 766 aa23.53■■□□□ 1.36
VPS36-204ENST00000480923 PDE4DIPQ5VU43 2346 aa23.53■■□□□ 1.36
VPS36-204ENST00000480923 SNAI1O95863 264 aaPredicted RBP23.52■■□□□ 1.36
VPS36-204ENST00000480923 ANTXR2P58335 489 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 NECTIN1Q15223 517 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 CDC37Q16543 378 aaPredicted RBP23.52■■□□□ 1.36
VPS36-204ENST00000480923 ADGRF4Q8IZF3 695 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 FAM133AQ8N9E0 248 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 CYP39A1Q9NYL5 469 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 ZHX1Q9UKY1 873 aaPredicted RBP23.52■■□□□ 1.36
VPS36-204ENST00000480923 ZNFX1Q9P2E3 1918 aaKnown RBP23.52■■□□□ 1.36
VPS36-204ENST00000480923 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.36
VPS36-204ENST00000480923 NFIBO00712 420 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 MYCNP04198 464 aaPredicted RBP23.51■■□□□ 1.35
VPS36-204ENST00000480923 ZNF865P0CJ78 1059 aaPredicted RBP23.51■■□□□ 1.35
VPS36-204ENST00000480923 RNF20Q5VTR2 975 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 ARMCX2Q7L311 632 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 ARRDC4Q8NCT1 418 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 SENP2Q9HC62 589 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 VAT1LQ9HCJ6 419 aa23.51■■□□□ 1.35
VPS36-204ENST00000480923 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.51■■□□□ 1.35
VPS36-204ENST00000480923 PLXNA1Q9UIW2 1896 aa23.5■■□□□ 1.35
VPS36-204ENST00000480923 PTPDC1A2A3K4 754 aa23.5■■□□□ 1.35
VPS36-204ENST00000480923 SOWAHBA6NEL2 793 aa23.5■■□□□ 1.35
VPS36-204ENST00000480923 PRC1O43663 620 aa23.5■■□□□ 1.35
VPS36-204ENST00000480923 EVI5O60447 810 aa23.5■■□□□ 1.35
VPS36-204ENST00000480923 RARBP10826 455 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms