RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 LCTP09848 1927 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 H0YGN5 161 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 SNHG28P0DPA3 235 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 ZNF543Q08ER8 600 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 ANKRD35Q8N283 1001 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 ANKS1AQ92625 1134 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 HOMER2Q9NSB8 354 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 RNF146Q9NTX7 359 aa19.98■□□□□ 0.79
HSPG2-209ENST00000480900 COL6A1P12109 1028 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 PTH1RQ03431 593 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 PRAMEF19Q5SWL8 479 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 SYDE2Q5VT97 1194 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 TTBK2Q6IQ55 1244 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 ZNF467Q7Z7K2 595 aaPredicted RBP19.97■□□□□ 0.79
HSPG2-209ENST00000480900 ZSCAN10Q96SZ4 725 aaPredicted RBP19.97■□□□□ 0.79
HSPG2-209ENST00000480900 RANBP17Q9H2T7 1088 aaKnown RBP19.97■□□□□ 0.79
HSPG2-209ENST00000480900 ZSWIM5Q9P217 1185 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
HSPG2-209ENST00000480900 FRMPD2Q68DX3 1309 aaPredicted RBP19.97■□□□□ 0.79
HSPG2-209ENST00000480900 SYNGAP1Q96PV0 1343 aa19.97■□□□□ 0.79
HSPG2-209ENST00000480900 EVI5O60447 810 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 ICAM1P05362 532 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 GPATCH4Q5T3I0 446 aaKnown RBP19.96■□□□□ 0.79
HSPG2-209ENST00000480900 CCDC174Q6PII3 467 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 MAMDC4Q6UXC1 1216 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 ENAHQ8N8S7 591 aaPredicted RBP19.96■□□□□ 0.79
HSPG2-209ENST00000480900 PNMA1Q8ND90 353 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 GPCPD1Q9NPB8 672 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 CNPY2Q9Y2B0 182 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 PFASO15067 1338 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 TNKSO95271 1327 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 DNAH12Q6ZR08 3092 aa19.96■□□□□ 0.79
HSPG2-209ENST00000480900 CYP21A2P08686 494 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 ALAS1P13196 640 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 SLC16A2P36021 539 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 SNAP25P60880 206 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 TRERF1Q96PN7 1200 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 UBAC1Q9BSL1 405 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 KAT14Q9H8E8 782 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 A1CFQ9NQ94 594 aaKnown RBP19.95■□□□□ 0.78
HSPG2-209ENST00000480900 CCPG1Q9ULG6 757 aa19.95■□□□□ 0.78
HSPG2-209ENST00000480900 DNM1LO00429 736 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 TRDNQ13061 729 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 BMP2KLQ5H9B9 411 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 ARRDC4Q8NCT1 418 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 FGD4Q96M96 766 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 PNMA2Q9UL42 364 aa19.94■□□□□ 0.78
HSPG2-209ENST00000480900 ZNF865P0CJ78 1059 aaPredicted RBP19.93■□□□□ 0.78
HSPG2-209ENST00000480900 FAM133AQ8N9E0 248 aa19.93■□□□□ 0.78
HSPG2-209ENST00000480900 MAP4K1Q92918 833 aa19.93■□□□□ 0.78
HSPG2-209ENST00000480900 LRRC37A2A6NM11 1700 aa19.93■□□□□ 0.78
HSPG2-209ENST00000480900 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
HSPG2-209ENST00000480900 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
HSPG2-209ENST00000480900 SNAI1O95863 264 aaPredicted RBP19.92■□□□□ 0.78
HSPG2-209ENST00000480900 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
HSPG2-209ENST00000480900 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
HSPG2-209ENST00000480900 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
HSPG2-209ENST00000480900 KBTBD13C9JR72 458 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 RARBP10826 455 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 AKR1A1P14550 325 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 CNTN2Q02246 1040 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 SEC23AQ15436 765 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 ASPRV1Q53RT3 343 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 IFIT1BQ5T764 474 aaKnown RBP19.91■□□□□ 0.78
HSPG2-209ENST00000480900 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 CYB5R4Q7L1T6 521 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 ARMCX2Q7L311 632 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 ESYT1Q9BSJ8 1104 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 RBM8AQ9Y5S9 174 aaKnown RBP19.91■□□□□ 0.78
HSPG2-209ENST00000480900 WDR19Q8NEZ3 1342 aa19.91■□□□□ 0.78
HSPG2-209ENST00000480900 RANBP2P49792 3224 aaKnown RBP19.9■□□□□ 0.78
HSPG2-209ENST00000480900 GOLGA8HP0CJ92 632 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
HSPG2-209ENST00000480900 RALYLQ86SE5 291 aaKnown RBP19.9■□□□□ 0.78
HSPG2-209ENST00000480900 SKAP1Q86WV1 359 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 C7orf61Q8IZ16 206 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 NCOA7Q8NI08 942 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 CCDC136Q96JN2 1154 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 ABHD16BQ9H3Z7 469 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.9■□□□□ 0.78
HSPG2-209ENST00000480900 CYP39A1Q9NYL5 469 aa19.9■□□□□ 0.78
HSPG2-209ENST00000480900 ASB14A6NK59 587 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 E7EWF7 191 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 PARP1P09874 1014 aaKnown RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 LRRC41Q15345 812 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 HABP4Q5JVS0 413 aaKnown RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 NSMFQ6X4W1 530 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 SENP6Q9GZR1 1112 aaPredicted RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 XPNPEP3Q9NQH7 507 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 ZHX1Q9UKY1 873 aaPredicted RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 FAM184BQ9ULE4 1060 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 COLQQ9Y215 455 aaPredicted RBP19.89■□□□□ 0.77
HSPG2-209ENST00000480900 TAF6LQ9Y6J9 622 aa19.89■□□□□ 0.77
HSPG2-209ENST00000480900 SOWAHBA6NEL2 793 aa19.88■□□□□ 0.77
HSPG2-209ENST00000480900 ACVR2BQ13705 512 aa19.88■□□□□ 0.77
HSPG2-209ENST00000480900 LRRC26Q2I0M4 334 aa19.88■□□□□ 0.77
HSPG2-209ENST00000480900 STOX1Q6ZVD7 989 aa19.88■□□□□ 0.77
HSPG2-209ENST00000480900 CCDC144CPQ8IYA2 1237 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms