RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 FDX1P10109 184 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 ADCY7P51828 1080 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 TTLL12Q14166 644 aaPredicted RBP16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 STK38Q15208 465 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 KLHL40Q2TBA0 621 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 DLK2Q6UY11 383 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 PRPF38AQ8NAV1 312 aaKnown RBP16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 KCNG4Q8TDN1 519 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 COA7Q96BR5 231 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 ANP32EQ9BTT0 268 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 RANBP17Q9H2T7 1088 aaKnown RBP16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 RIC8AQ9NPQ8 531 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 TMOD4Q9NZQ9 345 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 PNMA2Q9UL42 364 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 CEP131Q9UPN4 1083 aa16.96■□□□□ 0.31
SNRNP200-205ENST00000480835 GOLGA6L4A6NEF3 574 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 PPP1R11O60927 126 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 BMP15O95972 392 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 VCAM1P19320 739 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 MAP1SQ66K74 1059 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 SLF1Q9BQI6 1058 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 PCDHA1Q9Y5I3 950 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 CLIC4Q9Y696 253 aa16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 MORC2Q9Y6X9 1032 aaPredicted RBP16.95■□□□□ 0.3
SNRNP200-205ENST00000480835 CCDC194A0A1B0GVG4 234 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 FKBP1BP68106 108 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 CEBPZQ03701 1054 aaKnown RBP16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 PPATQ06203 517 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 SLC39A14Q15043 492 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 SF3A1Q15459 793 aaKnown RBP16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 CUL5Q93034 780 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 RPAP3Q9H6T3 665 aaPredicted RBP16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 PCDHA6Q9UN73 950 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 PCDHA8Q9Y5H6 950 aa16.94■□□□□ 0.3
SNRNP200-205ENST00000480835 LOC285556D6RIA3 1793 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 SPDYE5A6NIY4 337 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 SPTLC2O15270 562 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 PPP6R2O75170 966 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 HMGCS2P54868 508 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 LDLRAD1Q5T700 205 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 PIK3AP1Q6ZUJ8 805 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 TANGO6Q9C0B7 1094 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 PPP1R9AQ9ULJ8 1098 aa16.93■□□□□ 0.3
SNRNP200-205ENST00000480835 CXCL11O14625 94 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 PPIL2Q13356 520 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 NONOQ15233 471 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 PTPAQ15257 358 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 TTC38Q5R3I4 469 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 ELP3Q9H9T3 547 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 TRPM7Q96QT4 1865 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 ABCB11O95342 1321 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 MYPNQ86TC9 1320 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 RLFQ13129 1914 aa16.92■□□□□ 0.3
SNRNP200-205ENST00000480835 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 FLOT1O75955 427 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 ME1P48163 572 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 EARS2Q5JPH6 523 aaKnown RBP16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 GPT2Q8TD30 523 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 KCNH4Q9UQ05 1017 aa16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 MRPL11Q9Y3B7 192 aaKnown RBP16.91■□□□□ 0.3
SNRNP200-205ENST00000480835 A0A1W2PQ27 194 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 A0A1W2PQ64 194 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 A0A1W2PQD8 194 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 TRAF5O00463 557 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 ZBED4O75132 1171 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 ICAM1P05362 532 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 CLK2P49760 499 aaKnown RBP16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 SNAP25P60880 206 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 ORC2Q13416 577 aaPredicted RBP16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 ADALQ6DHV7 355 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
SNRNP200-205ENST00000480835 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms