RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 TMEM179Q6ZVK1 233 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 ZMYND12Q9H0C1 365 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 KANSL2Q9H9L4 492 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 ESPNB1AK53 854 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 GOLGA6L19H0YKK7 550 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 EPHX2P34913 555 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 NLRP12P59046 1061 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 SPDYE2Q495Y8 402 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 SYMPKQ92797 1274 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 ZNF541Q9H0D2 1346 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 JMJD4Q9H9V9 463 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 NYAP2Q9P242 653 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
PKNOX1-206ENST00000480179 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 FZD9O00144 591 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 FOXN1O15353 648 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 GH2P01242 217 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 CIAPIN1Q6FI81 312 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 ISM2Q6H9L7 571 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 GPC2Q8N158 579 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 COA7Q96BR5 231 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 EPSTI1Q96J88 318 aa16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 NAT10Q9H0A0 1025 aaKnown RBP16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
PKNOX1-206ENST00000480179 BECN2A8MW95 431 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 GNA11P29992 359 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 JAG1P78504 1218 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 HS1BP3Q53T59 392 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 SLFN13Q68D06 897 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 DHX40Q8IX18 779 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 DCAF4Q8WV16 495 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 HOOK1Q9UJC3 728 aaKnown RBP16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 SCN4AP35499 1836 aa16.57■□□□□ 0.24
PKNOX1-206ENST00000480179 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 A0A087X0B3 334 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 TMEM88BA6NKF7 163 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 ACTN4O43707 911 aaKnown RBP16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 CAPN15O75808 1086 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 ADCY7P51828 1080 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 FAM151AQ8WW52 585 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 DHX58Q96C10 678 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 PNMA6FA0A0J9YX94 578 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 SLC1A4P43007 532 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 POSTNQ15063 836 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.246e-7■■■■■ 34
PKNOX1-206ENST00000480179 IL17AQ16552 155 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 JAKMIP3Q5VZ66 844 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 SIAH1Q8IUQ4 282 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 MKL1Q969V6 931 aa16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 HERC5Q9UII4 1024 aaKnown RBP16.56■□□□□ 0.24
PKNOX1-206ENST00000480179 PPP1R11O60927 126 aaPredicted RBP16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 ZSCAN30Q86W11 494 aa16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 C4orf32Q8N8J7 132 aa16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 GJA3Q9Y6H8 435 aa16.55■□□□□ 0.24
PKNOX1-206ENST00000480179 ITGBL1O95965 494 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 ZNF75DP51815 510 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 PPP1R18Q6NYC8 613 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 MTMR14Q8NCE2 650 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 NUP88Q99567 741 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 TRIM5Q9C035 493 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 TMEM60Q9H2L4 133 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
PKNOX1-206ENST00000480179 ZBTB5O15062 677 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 MYO1BO43795 1136 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 ARL6IP4Q66PJ3 421 aaKnown RBP16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 MYOZ2Q9NPC6 264 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 NDUFB10O96000 172 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 TNIP1Q15025 636 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 KANK3Q6NY19 840 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
PKNOX1-206ENST00000480179 MTMR8Q96EF0 704 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms