RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 IFNAR1P17181 557 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 ZNF543Q08ER8 600 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 TEX2Q8IWB9 1127 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 ZNF713Q8N859 430 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 OPTNQ96CV9 577 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 RNF26Q9BY78 433 aaPredicted RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 UBE2OQ9C0C9 1292 aaKnown RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 ZCCHC17Q9NP64 241 aaKnown RBP13.36□□□□□ -0.27
HCLS1-206ENST00000479994 SLC45A1Q9Y2W3 748 aa13.36□□□□□ -0.27
HCLS1-206ENST00000479994 A0A0G2JLL6 359 aaPredicted RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 RAD21O60216 631 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SGPL1O95470 568 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 GNRH1P01148 92 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SLURP2P0DP57 97 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SYN1P17600 705 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 XBP1P17861 261 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 GRK4P32298 578 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 STAT2P52630 851 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 JAG1P78504 1218 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SSRP1Q08945 709 aaKnown RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 MTMR2Q13614 643 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 PRRT2Q7Z6L0 340 aaPredicted RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
HCLS1-206ENST00000479994 PNMA3Q9UL41 463 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 SMC3Q9UQE7 1217 aa13.35□□□□□ -0.27
HCLS1-206ENST00000479994 A0A1W2PRG0 241 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L15C9J2P7 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L13C9JLJ4 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L11C9JVI0 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L18D6R9N7 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L22D6RA61 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L17D6RBQ6 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L19D6RCP7 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L20D6RJB6 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 CD2BP2O95400 341 aaKnown RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 USP17L24Q0WX57 530 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 SCRN1Q12765 414 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 STK3Q13188 491 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 KIF22Q14807 665 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 BTNL9Q6UXG8 535 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 CCDC83Q8IWF9 413 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 FAM184AQ8NB25 1140 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 RRP36Q96EU6 259 aaKnown RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 MAD2L2Q9UI95 211 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 ARIH1Q9Y4X5 557 aaPredicted RBP13.34□□□□□ -0.27
HCLS1-206ENST00000479994 CDH23Q9H251 3354 aa13.34□□□□□ -0.27
HCLS1-206ENST00000479994 IRF6O14896 467 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 DEXIO95424 95 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 COL9A3Q14050 684 aaPredicted RBP13.33□□□□□ -0.28
HCLS1-206ENST00000479994 CLEC10AQ8IUN9 316 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 MAF1Q9H063 256 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 SENP2Q9HC62 589 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 HOXC10Q9NYD6 342 aa13.33□□□□□ -0.28
HCLS1-206ENST00000479994 COL11A1P12107 1806 aaPredicted RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 PRPF3O43395 683 aaKnown RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 FMNL1O95466 1100 aaPredicted RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 VCAM1P19320 739 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 OSBPP22059 807 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 CTGFP29279 349 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 HMGCS2P54868 508 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 TRIM29Q14134 588 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 PAWRQ96IZ0 340 aaKnown RBP13.32□□□□□ -0.28
HCLS1-206ENST00000479994 SLF1Q9BQI6 1058 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 GLT8D2Q9H1C3 349 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 SRRDQ9UH36 339 aa13.32□□□□□ -0.28
HCLS1-206ENST00000479994 AGTPBP1Q9UPW5 1226 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms