RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 SEC63Q9UGP8 760 aaKnown RBP14.52□□□□□ -0.09
TRAPPC12-218ENST00000479897 KIF3AQ9Y496 699 aa14.52□□□□□ -0.09
TRAPPC12-218ENST00000479897 SCG2P13521 617 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 AKAP17AQ02040 695 aaKnown RBP14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 TRAF1Q13077 416 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 OTUD7BQ6GQQ9 843 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 PPP1R18Q6NYC8 613 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 CCDC82Q8N4S0 544 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 ORC3Q9UBD5 711 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 SMC3Q9UQE7 1217 aa14.51□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZNF536O15090 1300 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 SMCHD1A6NHR9 2005 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZBED4O75132 1171 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 ALDH1A1P00352 501 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 ICAM1P05362 532 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 HSP90AA1P07900 732 aaKnown RBP14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 GJB2P29033 226 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 GCLCP48506 637 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 VEGFBP49765 207 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZIC5Q96T25 663 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 P2RX7Q99572 595 aaKnown RBP14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 CFHR5Q9BXR6 569 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 SH3GLB2Q9NR46 395 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZNF214Q9UL59 606 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 RABGAP1Q9Y3P9 1069 aa14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 V9GY48 417 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC12-218ENST00000479897 PPP1R11O60927 126 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 AOC2O75106 756 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 TEX2Q8IWB9 1127 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 IPO9Q96P70 1041 aaKnown RBP14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 AMNQ9BXJ7 453 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 VAT1LQ9HCJ6 419 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 BARHL2Q9NY43 387 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 MORF4L1Q9UBU8 362 aa14.49□□□□□ -0.09
TRAPPC12-218ENST00000479897 ESYT2A0FGR8 921 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 CNMDO75829 334 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 CYP2C8P10632 490 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 HTRA3P83110 453 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 GRM1Q13255 1194 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 TMEM132BQ14DG7 1078 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 TAF1CQ15572 869 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 WWC2Q6AWC2 1192 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 FBXO11Q86XK2 927 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 FAM184AQ8NB25 1140 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 CCDC148Q8NFR7 591 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 SMCR8Q8TEV9 937 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 DDX11Q96FC9 970 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 ALG1Q9BT22 464 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 TEX13BQ9BXU2 312 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 MAF1Q9H063 256 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZNF236Q9UL36 1845 aa14.48□□□□□ -0.09
TRAPPC12-218ENST00000479897 ABCB11O95342 1321 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 hCG_1642624A0A1W2PR95 340 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 STXBP3O00186 592 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 CA12O43570 354 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 XBP1P17861 261 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 PDCP20941 246 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 COPB2P35606 906 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 FAM110CQ1W6H9 321 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 TKFCQ3LXA3 575 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 CCDC12Q8WUD4 166 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 BTBD7Q9P203 1132 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 RBPJLQ9UBG7 517 aa14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 CTDP1Q9Y5B0 961 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC12-218ENST00000479897 TLR2O60603 784 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 PPFIA3O75145 1194 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 BCRP11274 1271 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 DDIT3P35638 169 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 ERVK-24P63145 666 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 GHRHRQ02643 423 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 TYW1BQ6NUM6 668 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 CCDC174Q6PII3 467 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 RIOX2Q8IUF8 465 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 SHCBP1Q8NEM2 672 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 GPKOWQ92917 476 aaPredicted RBP eCLIP14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 SHISA4Q96DD7 197 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 AIFM3Q96NN9 605 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 SPATC1LQ9H0A9 340 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 TXNRD2Q9NNW7 524 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 CCPG1Q9ULG6 757 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 PCDHA1Q9Y5I3 950 aa14.46□□□□□ -0.09
TRAPPC12-218ENST00000479897 PLXNB2O15031 1838 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 LCTP09848 1927 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 MGAMO43451 1857 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 SLC25A27O95847 323 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 STAT3P40763 770 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 SNAP25P60880 206 aa14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 SNRNP48Q6IEG0 339 aaKnown RBP14.45□□□□□ -0.1
TRAPPC12-218ENST00000479897 GALNT17Q6IS24 598 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms