RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SLC35F6Q8N357 371 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 ACRBPQ8NEB7 543 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 ZNF507Q8TCN5 953 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 CCDC47Q96A33 483 aaKnown RBP27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 SPZ1Q9BXG8 430 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 EPC1Q9H2F5 836 aa27.68■■■□□ 2.02
SYNGAP1-206ENST00000479510 SASH3O75995 380 aa27.67■■■□□ 2.02
SYNGAP1-206ENST00000479510 CYP2C19P33261 490 aa27.67■■■□□ 2.02
SYNGAP1-206ENST00000479510 SMARCA1P28370 1054 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 C15orf52Q6ZUT6 534 aaKnown RBP27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 KRT25Q7Z3Z0 450 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 TXNRD3Q86VQ6 643 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 RASSF8Q8NHQ8 419 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 MAGEC2Q9UBF1 373 aaPredicted RBP27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 CAPN11Q9UMQ6 739 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 EPN1Q9Y6I3 576 aaPredicted RBP27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 DNM2P50570 870 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 LONRF2Q1L5Z9 754 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 RETREG2Q8NC44 543 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 SH3RF3Q8TEJ3 882 aaPredicted RBP27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 ZMYND12Q9H0C1 365 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 TMEM60Q9H2L4 133 aa27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 LUC7L2Q9Y383 392 aaKnown RBP27.66■■■□□ 2.02
SYNGAP1-206ENST00000479510 BAZ2BQ9UIF8 2168 aaKnown RBP27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 RNF225M0QZC1 329 aaPredicted RBP27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 ERLIN1O75477 346 aa27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 NDUFA10O95299 355 aa27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 TSR1Q2NL82 804 aaKnown RBP27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 HEATR3Q7Z4Q2 680 aa27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 RASGRP4Q8TDF6 673 aa27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 NUP58Q9BVL2 599 aa27.65■■■□□ 2.02
SYNGAP1-206ENST00000479510 A0A0U1RQJ8 604 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 MAP2K7O14733 419 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 SMC1AQ14683 1233 aaKnown RBP27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 INF2Q27J81 1249 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 ATRIPQ8WXE1 791 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 DYNLL2Q96FJ2 89 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 HAUS4Q9H6D7 363 aa27.64■■■□□ 2.02
SYNGAP1-206ENST00000479510 BICDL2A1A5D9 508 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 CYTH3O43739 400 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 COBLO75128 1261 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 CDC25AP30304 524 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 SLC35G1Q2M3R5 365 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 TTI2Q6NXR4 508 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 TMEM47Q9BQJ4 181 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 ANKZF1Q9H8Y5 726 aa27.64■■■□□ 2.01
SYNGAP1-206ENST00000479510 COBLL1Q53SF7 1204 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 FAM114A1Q8IWE2 563 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 SRP68Q9UHB9 627 aaKnown RBP27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 NAV1Q8NEY1 1877 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 TTC26A0AVF1 554 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 CTAGE15A4D2H0 777 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 CTAGE8P0CG41 777 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 ZNF804AQ7Z570 1209 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 CTAGE6Q86UF2 777 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 CTAGE4Q8IX94 777 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 TRIM47Q96LD4 638 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 GBP3Q9H0R5 595 aa27.63■■■□□ 2.01
SYNGAP1-206ENST00000479510 SRGNP10124 158 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 GNA11P29992 359 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 AMPD2Q01433 879 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 IQCDQ96DY2 449 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 C7orf25Q9BPX7 421 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 SLF1Q9BQI6 1058 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 PUF60Q9UHX1 559 aaKnown RBP27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 MAPK8IP1Q9UQF2 711 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 MYH8P13535 1937 aa27.62■■■□□ 2.01
SYNGAP1-206ENST00000479510 USP17L3A6NCW0 530 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 USP17L4A6NCW7 530 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 OR52Z1P0C646 297 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 RASA1P20936 1047 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 MEA1Q16626 185 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 USP17L1Q7RTZ2 530 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 EHBP1Q8NDI1 1231 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 C6orf50Q9HD87 102 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 FLT1P17948 1338 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 PSMD14O00487 310 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 OAS2P29728 719 aaKnown RBP27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 HOXA7P31268 230 aaPredicted RBP27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 KRT83P78385 493 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 GRAPQ13588 217 aa27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 NONOQ15233 471 aaKnown RBP eCLIP27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 GRAPLQ8TC17 118 aaPredicted RBP27.61■■■□□ 2.01
SYNGAP1-206ENST00000479510 TRIM49BA6NDI0 452 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 CCNE1P24864 410 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 AMPD3Q01432 767 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 GPS2Q13227 327 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 CABP7Q86V35 215 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 MYO6Q9UM54 1294 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 PP2D1A8MPX8 630 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 KLRF2D3W0D1 207 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 PMS1P54277 932 aaKnown RBP27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 BEND6Q5SZJ8 279 aaPredicted RBP27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 HDXQ7Z353 690 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 ANKIB1Q9P2G1 1089 aa27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 REXO2Q9Y3B8 237 aaKnown RBP27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
SYNGAP1-206ENST00000479510 NEDD1Q8NHV4 660 aa27.59■■■□□ 2.01
SYNGAP1-206ENST00000479510 TGFBRAP1Q8WUH2 860 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms