RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 SYMPKQ92797 1274 aaKnown RBP13.17□□□□□ -0.3
HDLBP-237ENST00000479169 OSBP2Q969R2 916 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
HDLBP-237ENST00000479169 SLC38A10Q9HBR0 1119 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 EPB41L4AQ9HCS5 686 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-237ENST00000479169 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
HDLBP-237ENST00000479169 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-237ENST00000479169 TCF20Q9UGU0 1960 aaKnown RBP13.16□□□□□ -0.3
HDLBP-237ENST00000479169 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
HDLBP-237ENST00000479169 ARVCFO00192 962 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CTAGE5O15320 804 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 PRDM1O75626 825 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 MS4A1P11836 297 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 PTGS1P23219 599 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CYP2C18P33260 490 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 BEX3Q00994 111 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CNTN2Q02246 1040 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 TSHZ3Q63HK5 1081 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.16□□□□□ -0.3
HDLBP-237ENST00000479169 FAM126BQ8IXS8 530 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 PCSK9Q8NBP7 692 aaKnown RBP13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 ABHD16BQ9H3Z7 469 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 PRDM12Q9H4Q4 367 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
HDLBP-237ENST00000479169 DDX49Q9Y6V7 483 aaKnown RBP13.16□□□□□ -0.3
HDLBP-237ENST00000479169 ASTN1O14525 1302 aa13.15□□□□□ -0.3
HDLBP-237ENST00000479169 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-237ENST00000479169 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.3
HDLBP-237ENST00000479169 MIER1Q8N108 512 aa13.15□□□□□ -0.3
HDLBP-237ENST00000479169 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
HDLBP-237ENST00000479169 SCN5AQ14524 2016 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 M0R2C6 588 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 GPAA1O43292 621 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 CD4P01730 458 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 TDO2P48775 406 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 CCDC174Q6PII3 467 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-237ENST00000479169 TMEM199Q8N511 208 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 CHST13Q8NET6 341 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 APPBP2Q92624 585 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-237ENST00000479169 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 CXXC1Q9P0U4 656 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-237ENST00000479169 FBXO40Q9UH90 709 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 ISY1Q9ULR0 285 aaKnown RBP13.14□□□□□ -0.31
HDLBP-237ENST00000479169 XIRP2A4UGR9 3374 aa13.14□□□□□ -0.31
HDLBP-237ENST00000479169 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 BDP1A6H8Y1 2624 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
HDLBP-237ENST00000479169 SLFN13Q68D06 897 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-237ENST00000479169 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
HDLBP-237ENST00000479169 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 GMCL1P1Q8NEA9 526 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 MKL1Q969V6 931 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 IL23AQ9NPF7 189 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 A1CFQ9NQ94 594 aaKnown RBP13.13□□□□□ -0.31
HDLBP-237ENST00000479169 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 TRANK1O15050 2925 aa13.13□□□□□ -0.31
HDLBP-237ENST00000479169 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
HDLBP-237ENST00000479169 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 RNF113AO15541 343 aaKnown RBP13.12□□□□□ -0.31
HDLBP-237ENST00000479169 TTLL1O95922 423 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 APPP05067 770 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 BMP3P12645 472 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 OAZ1P54368 228 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 SNAP25P60880 206 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 NKX3-2P78367 333 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-237ENST00000479169 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 HERVK_113Q902F9 699 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 HIPK3Q9H422 1215 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 THEGQ9P2T0 379 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 RAPGEFL1Q9UHV5 662 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
HDLBP-237ENST00000479169 ZNF536O15090 1300 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms