RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 AKNAD1Q5T1N1 836 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 GPR153Q6NV75 609 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 TDHQ8IZJ6 230 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 TTC14Q96N46 770 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 ABHD16BQ9H3Z7 469 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 RNF41Q9H4P4 317 aaPredicted RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 FAM184BQ9ULE4 1060 aa23.43■■□□□ 1.34
HPS4-211ENST00000479064 ISY1Q9ULR0 285 aaKnown RBP23.43■■□□□ 1.34
HPS4-211ENST00000479064 TAL1P17542 331 aaPredicted RBP23.42■■□□□ 1.34
HPS4-211ENST00000479064 BTNL9Q6UXG8 535 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 MFSD6Q6ZSS7 791 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 KCTD1Q719H9 257 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 TSEN34Q9BSV6 310 aaKnown RBP23.42■■□□□ 1.34
HPS4-211ENST00000479064 UBE2OQ9C0C9 1292 aaKnown RBP23.42■■□□□ 1.34
HPS4-211ENST00000479064 TOMM22Q9NS69 142 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 PRKAG2Q9UGJ0 569 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 PRR12Q9ULL5 1215 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 SZT2Q5T011 3432 aa23.42■■□□□ 1.34
HPS4-211ENST00000479064 DNAH12Q6ZR08 3092 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 ADCYAP1R1P41586 468 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 SLC4A3P48751 1232 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 FAM133AQ8N9E0 248 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 FGD4Q96M96 766 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 RNF146Q9NTX7 359 aa23.41■■□□□ 1.34
HPS4-211ENST00000479064 LTBP2Q14767 1821 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 ADAMTS4O75173 837 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 DUSP11O75319 330 aaKnown RBP23.4■■□□□ 1.34
HPS4-211ENST00000479064 ACVR2BQ13705 512 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 RRP12Q5JTH9 1297 aaKnown RBP23.4■■□□□ 1.34
HPS4-211ENST00000479064 LBHD1Q9BQE6 289 aaPredicted RBP23.4■■□□□ 1.34
HPS4-211ENST00000479064 TMEM47Q9BQJ4 181 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 DIAPH3Q9NSV4 1193 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.4■■□□□ 1.34
HPS4-211ENST00000479064 PNMA2Q9UL42 364 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 LAMA3Q16787 3333 aa23.4■■□□□ 1.34
HPS4-211ENST00000479064 POTEB2H3BUK9 544 aa23.39■■□□□ 1.33
HPS4-211ENST00000479064 AGBL1Q96MI9 1066 aa23.39■■□□□ 1.33
HPS4-211ENST00000479064 TRERF1Q96PN7 1200 aa23.39■■□□□ 1.33
HPS4-211ENST00000479064 A1CFQ9NQ94 594 aaKnown RBP23.39■■□□□ 1.33
HPS4-211ENST00000479064 ATP11BQ9Y2G3 1177 aa23.39■■□□□ 1.33
HPS4-211ENST00000479064 MOXD2PA6NHM9 499 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 PGK1P00558 417 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 MYCNP04198 464 aaPredicted RBP23.38■■□□□ 1.33
HPS4-211ENST00000479064 ICAM1P05362 532 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 CST5P28325 142 aaPredicted RBP23.38■■□□□ 1.33
HPS4-211ENST00000479064 HAND2P61296 217 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 CCDC96Q2M329 555 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 ARMCX2Q7L311 632 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 KLHDC9Q8NEP7 349 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 ESR2Q92731 530 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 DSCC1Q9BVC3 393 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 RANBP17Q9H2T7 1088 aaKnown RBP23.38■■□□□ 1.33
HPS4-211ENST00000479064 HOMER2Q9NSB8 354 aa23.38■■□□□ 1.33
HPS4-211ENST00000479064 ZHX1Q9UKY1 873 aaPredicted RBP23.38■■□□□ 1.33
HPS4-211ENST00000479064 ASB14A6NK59 587 aa23.37■■□□□ 1.33
HPS4-211ENST00000479064 SOX1O00570 391 aaPredicted RBP23.37■■□□□ 1.33
HPS4-211ENST00000479064 ZNF213O14771 459 aa23.37■■□□□ 1.33
HPS4-211ENST00000479064 CCDC178Q5BJE1 867 aa23.37■■□□□ 1.33
HPS4-211ENST00000479064 CWC27Q6UX04 472 aaKnown RBP23.37■■□□□ 1.33
HPS4-211ENST00000479064 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
HPS4-211ENST00000479064 SYNRGQ9UMZ2 1314 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 SNHG28P0DPA3 235 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 PDHBP11177 359 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 ALAS1P13196 640 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 MDM2Q00987 491 aaPredicted RBP23.36■■□□□ 1.33
HPS4-211ENST00000479064 TRIM60Q495X7 471 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 DGKHQ86XP1 1220 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 TBC1D10CQ8IV04 446 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 CCDC144CPQ8IYA2 1237 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 NUP133Q8WUM0 1156 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 KATNBL1Q9H079 304 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 SPC25Q9HBM1 224 aa23.36■■□□□ 1.33
HPS4-211ENST00000479064 LOC102724159A0A0B4J2E5 919 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 A0A1W2PQ45 241 aaPredicted RBP23.35■■□□□ 1.33
HPS4-211ENST00000479064 A0A1W2PQY0 241 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 NKX3-2P78367 333 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 CNTN2Q02246 1040 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 PWP2Q15269 919 aaKnown RBP23.35■■□□□ 1.33
HPS4-211ENST00000479064 SYDE2Q5VT97 1194 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 CCSAPQ6IQ19 270 aaPredicted RBP23.35■■□□□ 1.33
HPS4-211ENST00000479064 CCDC174Q6PII3 467 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 PCSK9Q8NBP7 692 aaKnown RBP23.35■■□□□ 1.33
HPS4-211ENST00000479064 FERMT2Q96AC1 680 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 UPF3AQ9H1J1 476 aaKnown RBP23.35■■□□□ 1.33
HPS4-211ENST00000479064 CCPG1Q9ULG6 757 aa23.35■■□□□ 1.33
HPS4-211ENST00000479064 ACLYP53396 1101 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 GJA9P57773 515 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 CCDC144BQ3MJ40 725 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 RASGRP2Q7LDG7 609 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 IQCA1Q86XH1 822 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 LRCH3Q96II8 777 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 TOX2Q96NM4 488 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 PDLIM7Q9NR12 457 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 CYP39A1Q9NYL5 469 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 CTNNA3Q9UI47 895 aa23.34■■□□□ 1.33
HPS4-211ENST00000479064 LCTP09848 1927 aa23.33■■□□□ 1.33
HPS4-211ENST00000479064 ZNF543Q08ER8 600 aa23.33■■□□□ 1.33
HPS4-211ENST00000479064 GPATCH4Q5T3I0 446 aaKnown RBP23.33■■□□□ 1.33
HPS4-211ENST00000479064 TTBK2Q6IQ55 1244 aa23.33■■□□□ 1.33
HPS4-211ENST00000479064 LENG1Q96BZ8 264 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms