RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	GABPA	Q06546	454 aa		31.19	■■■□□ 2.58
CHKB-208	ENST00000479003	PTPN21	Q16825	1174 aa		31.19	■■■□□ 2.58
CHKB-208	ENST00000479003	FHDC1	Q9C0D6	1143 aa	Predicted RBP	31.19	■■■□□ 2.58
CHKB-208	ENST00000479003	SAMSN1	Q9NSI8	373 aa	Known RBP	31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	ARHGAP6	O43182	974 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	AFM	P43652	599 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	GOLGA8F	Q08AF8	430 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	GOLGA8DP	Q0D2H9	430 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	DPYD	Q12882	1025 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	PTGDR	Q13258	359 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	SPECC1L	Q69YQ0	1117 aa		31.18	■■■□□ 2.58
CHKB-208	ENST00000479003	KIF5B	P33176	963 aa		31.17	■■■□□ 2.58
CHKB-208	ENST00000479003	NLRP5	P59047	1200 aa		31.17	■■■□□ 2.58
CHKB-208	ENST00000479003	ETF1	P62495	437 aa	Known RBP	31.17	■■■□□ 2.58
CHKB-208	ENST00000479003	CIAPIN1	Q6FI81	312 aa		31.17	■■■□□ 2.58
CHKB-208	ENST00000479003	GSDMA	Q96QA5	445 aa		31.17	■■■□□ 2.58
CHKB-208	ENST00000479003	SPDYE2B	A6NHP3	402 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	SPDYE6	P0CI01	402 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	NR1I3	Q14994	352 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	OGFOD1	Q8N543	542 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	AGBL3	Q8NEM8	1001 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	PRDM4	Q9UKN5	801 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	PHLPP2	Q6ZVD8	1323 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	REXO1L1P	Q8IX06	675 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	FEZ1	Q99689	392 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	SERPINB13	Q9UIV8	391 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	HDAC9	Q9UKV0	1011 aa		31.16	■■■□□ 2.58
CHKB-208	ENST00000479003	BAZ2B	Q9UIF8	2168 aa	Known RBP	31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	VWA3A	A6NCI4	1184 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	SLURP2	P0DP57	97 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	CUL4B	Q13620	913 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	HOMER1	Q86YM7	354 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003		A0A1B0GTH6	734 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	SPATA1	Q5VX52	437 aa		31.15	■■■□□ 2.58
CHKB-208	ENST00000479003	SIPA1L1	O43166	1804 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	DDTL	A6NHG4	134 aa	Predicted RBP	31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	ZSCAN12	O43309	604 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	TRIM65	Q6PJ69	517 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	PIK3AP1	Q6ZUJ8	805 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	SH3BP5L	Q7L8J4	393 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	DGKH	Q86XP1	1220 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	TC2N	Q8N9U0	490 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	ANKS1A	Q92625	1134 aa		31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	BAG1	Q99933	345 aa	Predicted RBP	31.14	■■■□□ 2.58
CHKB-208	ENST00000479003	CD44	P16070	742 aa	Known RBP	31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	KAT14	Q9H8E8	782 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	TCP11L1	Q9NUJ3	509 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	STX10	O60499	249 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	HLA-DOA	P06340	250 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	VEGFA	P15692	232 aa	Predicted RBP	31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	DLGAP5	Q15398	846 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	E2F4	Q16254	413 aa		31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	PYM1	Q9BRP8	204 aa	Known RBP	31.13	■■■□□ 2.57
CHKB-208	ENST00000479003	CALML3	P27482	149 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	CASP1	P29466	404 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	CBX1	P83916	185 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	SH3GLB2	Q9NR46	395 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	MYH8	P13535	1937 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	SYNRG	Q9UMZ2	1314 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	SHTN1	A0MZ66	631 aa		31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	APTX	Q7Z2E3	356 aa	Known RBP	31.12	■■■□□ 2.57
CHKB-208	ENST00000479003	CLRN2	A0PK11	232 aa		31.11	■■■□□ 2.57
CHKB-208	ENST00000479003	NPM3	O75607	178 aa	Known RBP	31.11	■■■□□ 2.57
CHKB-208	ENST00000479003	ZNF397	Q8NF99	534 aa	Predicted RBP	31.11	■■■□□ 2.57
CHKB-208	ENST00000479003	NEDD1	Q8NHV4	660 aa		31.11	■■■□□ 2.57
CHKB-208	ENST00000479003	PPP2R2C	Q9Y2T4	447 aa		31.11	■■■□□ 2.57
CHKB-208	ENST00000479003	PPP1R3G	B7ZBB8	358 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	IQUB	Q8NA54	791 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	DHX36	Q9H2U1	1008 aa	Known RBP	31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	DNAJC18	Q9H819	358 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	STX8	Q9UNK0	236 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	SHMT1	P34896	483 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	CDKAL1	Q5VV42	579 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	DNAI1	Q9UI46	699 aa		31.1	■■■□□ 2.57
CHKB-208	ENST00000479003		V9GYY5	206 aa	Predicted RBP	31.1	■■■□□ 2.57
CHKB-208	ENST00000479003	ADAMTS3	O15072	1205 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	TNIP1	Q15025	636 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	IL17A	Q16552	155 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	EHD4	Q9H223	541 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	SWAP70	Q9UH65	585 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	MCM7	P33993	719 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	GRM4	Q14833	912 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	ELF2	Q15723	593 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	CCDC178	Q5BJE1	867 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	ARL6IP4	Q66PJ3	421 aa	Known RBP	31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	PDXDC2P	Q6P474	469 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	BLID	Q8IZY5	108 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	PNMA1	Q8ND90	353 aa		31.09	■■■□□ 2.57
CHKB-208	ENST00000479003	FAM196B	A6NMK8	535 aa		31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	FZD9	O00144	591 aa		31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	ADK	P55263	362 aa	Known RBP	31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	KLHL10	Q6JEL2	608 aa		31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	CEP95	Q96GE4	821 aa		31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	ZNF70	Q9UC06	446 aa	Predicted RBP	31.08	■■■□□ 2.57
CHKB-208	ENST00000479003	GOLGA6L9	A6NEM1	432 aa		31.07	■■■□□ 2.56
CHKB-208	ENST00000479003	SPDYE4	A6NLX3	237 aa		31.07	■■■□□ 2.56
CHKB-208	ENST00000479003	AKR1B1	P15121	316 aa		31.07	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms