RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.02■□□□□ -0
HDAC8-217ENST00000478743 ZNF214Q9UL59 606 aaPredicted RBP15.02■□□□□ -0
HDAC8-217ENST00000478743 MAMDC4Q6UXC1 1216 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 ATF7IPQ6VMQ6 1270 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 SIAH1Q8IUQ4 282 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 MIGA1Q8NAN2 632 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 NEK9Q8TD19 979 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 PPP1R13LQ8WUF5 828 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 CABP5Q9NP86 173 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 COPRSQ9NQ92 184 aa15.01□□□□□ -0.01
HDAC8-217ENST00000478743 TRMT13Q9NUP7 481 aaKnown RBP15.01□□□□□ -0.01
HDAC8-217ENST00000478743 DNAJC25-GNG10A0A024R161 153 aa15□□□□□ -0.01
HDAC8-217ENST00000478743 PIH1D3Q9NQM4 214 aaKnown RBP15□□□□□ -0.01
HDAC8-217ENST00000478743 ADAMTS5Q9UNA0 930 aa15□□□□□ -0.01
HDAC8-217ENST00000478743 DDX49Q9Y6V7 483 aaKnown RBP15□□□□□ -0.01
HDAC8-217ENST00000478743 SOWAHBA6NEL2 793 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 CYP2E1P05181 493 aaPredicted RBP14.99□□□□□ -0.01
HDAC8-217ENST00000478743 NKX3-2P78367 333 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 GABPAQ06546 454 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 TMEM63BQ5T3F8 832 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 ASCL5Q7RTU5 278 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 LMCD1Q9NZU5 365 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 RIPK3Q9Y572 518 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 CACNA1BQ00975 2339 aa14.99□□□□□ -0.01
HDAC8-217ENST00000478743 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
HDAC8-217ENST00000478743 STAT3P40763 770 aa14.98□□□□□ -0.01
HDAC8-217ENST00000478743 DEFB103AP81534 67 aa14.98□□□□□ -0.01
HDAC8-217ENST00000478743 PHOSPHO2Q8TCD6 241 aa14.98□□□□□ -0.01
HDAC8-217ENST00000478743 SPC25Q9HBM1 224 aa14.98□□□□□ -0.01
HDAC8-217ENST00000478743 KMT2BQ9UMN6 2715 aaPredicted RBP14.98□□□□□ -0.01
HDAC8-217ENST00000478743 VWA5AO00534 786 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 PFKMP08237 780 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 USP5P45974 858 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 VCPP55072 806 aaKnown RBP14.97□□□□□ -0.01
HDAC8-217ENST00000478743 TCTN1Q2MV58 587 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 ARMCX2Q7L311 632 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 WDR63Q8IWG1 891 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 MSL3Q8N5Y2 521 aaKnown RBP14.97□□□□□ -0.01
HDAC8-217ENST00000478743 ALDH8A1Q9H2A2 487 aaPredicted RBP14.97□□□□□ -0.01
HDAC8-217ENST00000478743 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
HDAC8-217ENST00000478743 LCTP09848 1927 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 CACNA1HO95180 2353 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 LINC01553A4QN01 128 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 UBTFL1P0CB47 393 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-217ENST00000478743 HERC4Q5GLZ8 1057 aaPredicted RBP14.96□□□□□ -0.01
HDAC8-217ENST00000478743 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 ADHFE1Q8IWW8 467 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 GNEQ9Y223 722 aaKnown RBP14.96□□□□□ -0.01
HDAC8-217ENST00000478743 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
HDAC8-217ENST00000478743 TMEM221A6NGB7 291 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 M0R296 226 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 ACTN1P12814 892 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 CYP7A1P22680 504 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
HDAC8-217ENST00000478743 ABHD16BQ9H3Z7 469 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 PPP1R9AQ9ULJ8 1098 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 VPS13AQ96RL7 3174 aa14.95□□□□□ -0.02
HDAC8-217ENST00000478743 TNKSO95271 1327 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 PTPRCP08575 1304 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 MED19A0JLT2 244 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-217ENST00000478743 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 WDR46O15213 610 aaKnown RBP14.94□□□□□ -0.02
HDAC8-217ENST00000478743 CYP2D6P10635 497 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 AKR1B1P15121 316 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 ZAP70P43403 619 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 ERVK-21P61565 698 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 WDR5P61964 334 aaKnown RBP14.94□□□□□ -0.02
HDAC8-217ENST00000478743 CLUL1Q15846 466 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 ERMP1Q7Z2K6 904 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 PBXIP1Q96AQ6 731 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 DDX11Q96FC9 970 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 C17orf80Q9BSJ5 609 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 TMX2Q9Y320 296 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 TRIP12Q14669 1992 aaPredicted RBP14.94□□□□□ -0.02
HDAC8-217ENST00000478743 DNAH14Q0VDD8 3507 aa14.94□□□□□ -0.02
HDAC8-217ENST00000478743 CABYRO75952 493 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 TNFAIP2Q03169 654 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 GPNMBQ14956 572 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 SNRNP48Q6IEG0 339 aaKnown RBP14.93□□□□□ -0.02
HDAC8-217ENST00000478743 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 BMP8AQ7Z5Y6 402 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 ZNF467Q7Z7K2 595 aaPredicted RBP14.93□□□□□ -0.02
HDAC8-217ENST00000478743 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 EDAQ92838 391 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 FTOQ9C0B1 505 aaKnown RBP eCLIP14.93□□□□□ -0.02
HDAC8-217ENST00000478743 PRKAG3Q9UGI9 489 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 NLRC5Q86WI3 1866 aa14.93□□□□□ -0.02
HDAC8-217ENST00000478743 IQCF3P0C7M6 154 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 UQCRFS1P1P0C7P4 283 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 SMPD1P17405 629 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 CNTN2Q02246 1040 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 ICA1Q05084 483 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 PUS10Q3MIT2 529 aaKnown RBP14.92□□□□□ -0.02
HDAC8-217ENST00000478743 TCEAL5Q5H9L2 206 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 FAM83BQ5T0W9 1011 aa14.92□□□□□ -0.02
HDAC8-217ENST00000478743 NOL8Q76FK4 1167 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms