RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 FGD4Q96M96 766 aa15.44■□□□□ 0.06
ABCF3-212ENST00000478288 FSD1Q9BTV5 496 aa15.44■□□□□ 0.06
ABCF3-212ENST00000478288 UPF3AQ9H1J1 476 aaKnown RBP15.44■□□□□ 0.06
ABCF3-212ENST00000478288 RAVER2Q9HCJ3 691 aaKnown RBP15.44■□□□□ 0.06
ABCF3-212ENST00000478288 STARD7Q9NQZ5 370 aa15.44■□□□□ 0.06
ABCF3-212ENST00000478288 ZHX1Q9UKY1 873 aaPredicted RBP15.44■□□□□ 0.06
ABCF3-212ENST00000478288 PCDHB15Q9Y5E8 787 aa15.44■□□□□ 0.06
ABCF3-212ENST00000478288 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
ABCF3-212ENST00000478288 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
ABCF3-212ENST00000478288 TMEM265A0A087WTH1 108 aa15.43■□□□□ 0.06
ABCF3-212ENST00000478288 PQBP1O60828 265 aaKnown RBP15.43■□□□□ 0.06
ABCF3-212ENST00000478288 PCSK9Q8NBP7 692 aaKnown RBP15.43■□□□□ 0.06
ABCF3-212ENST00000478288 CHURC1Q8WUH1 139 aa15.43■□□□□ 0.06
ABCF3-212ENST00000478288 SEC62Q99442 399 aaKnown RBP15.43■□□□□ 0.06
ABCF3-212ENST00000478288 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
ABCF3-212ENST00000478288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
ABCF3-212ENST00000478288 LRRC37A2A6NM11 1700 aa15.43■□□□□ 0.06
ABCF3-212ENST00000478288 NCOR1O75376 2440 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 RAG1P15918 1043 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 ITGB8P26012 769 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 GJA9P57773 515 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 TFAP4Q01664 338 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 FAAP100Q0VG06 881 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 KCNA10Q16322 511 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 TKFCQ3LXA3 575 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 FAM133AQ8N9E0 248 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 STAG1Q8WVM7 1258 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 GLT1D1Q96MS3 346 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 ACAD9Q9H845 621 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 SPC25Q9HBM1 224 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 CHD9Q3L8U1 2897 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 MUC3AQ02505 3323 aa15.42■□□□□ 0.06
ABCF3-212ENST00000478288 DCDC2CA8MYV0 355 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 FOXP2O15409 715 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 SLC1A4P43007 532 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 NOVP48745 357 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 FPGSQ05932 587 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 CCDC144BQ3MJ40 725 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 OTUD7AQ8TE49 926 aaPredicted RBP15.41■□□□□ 0.06
ABCF3-212ENST00000478288 TMEM39AQ9NV64 488 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 ANAPC4Q9UJX5 808 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 TBX21Q9UL17 535 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 LCTP09848 1927 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 ZNF536O15090 1300 aa15.41■□□□□ 0.06
ABCF3-212ENST00000478288 TMEM232C9JQI7 657 aa15.4■□□□□ 0.06
ABCF3-212ENST00000478288 FGRP09769 529 aa15.4■□□□□ 0.06
ABCF3-212ENST00000478288 CDK7P50613 346 aa15.4■□□□□ 0.06
ABCF3-212ENST00000478288 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
ABCF3-212ENST00000478288 RNPC3Q96LT9 517 aaKnown RBP15.4■□□□□ 0.06
ABCF3-212ENST00000478288 SEMA6BQ9H3T3 888 aa15.4■□□□□ 0.06
ABCF3-212ENST00000478288 A1CFQ9NQ94 594 aaKnown RBP15.4■□□□□ 0.06
ABCF3-212ENST00000478288 A0A0U1RQG5 324 aaPredicted RBP15.39■□□□□ 0.05
ABCF3-212ENST00000478288 MYADML2A6NDP7 307 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ASB14A6NK59 587 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 TSPY2A6NKD2 308 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ADCY6O43306 1168 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ORC4O43929 436 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 TIMP1P01033 207 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ALX1Q15699 326 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.39■□□□□ 0.05
ABCF3-212ENST00000478288 EVI5LQ96CN4 794 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 CDX2Q99626 313 aaPredicted RBP15.39■□□□□ 0.05
ABCF3-212ENST00000478288 HOMER2Q9NSB8 354 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 RNF146Q9NTX7 359 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 STX8Q9UNK0 236 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
ABCF3-212ENST00000478288 ASGR1P07306 291 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 MCCP23508 829 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 EPHB4P54760 987 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 MFSD5Q6N075 450 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 CCDC174Q6PII3 467 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 FAM161BQ96MY7 647 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 SEZ6LQ9BYH1 1024 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 TTYH1Q9H313 450 aaPredicted RBP15.38■□□□□ 0.05
ABCF3-212ENST00000478288 IL17RBQ9NRM6 502 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 HELLSQ9NRZ9 838 aa15.38■□□□□ 0.05
ABCF3-212ENST00000478288 ARVCFO00192 962 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 CTAGE5O15320 804 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
ABCF3-212ENST00000478288 IKQ13123 557 aaPredicted RBP15.37■□□□□ 0.05
ABCF3-212ENST00000478288 HDAC1Q13547 482 aaPredicted RBP15.37■□□□□ 0.05
ABCF3-212ENST00000478288 GNASQ5JWF2 1037 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 CCDC129Q6ZRS4 1044 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 AGBL1Q96MI9 1066 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 TRERF1Q96PN7 1200 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
ABCF3-212ENST00000478288 PRR12Q9ULL5 1215 aa15.37■□□□□ 0.05
ABCF3-212ENST00000478288 GNEQ9Y223 722 aaKnown RBP15.37■□□□□ 0.05
ABCF3-212ENST00000478288 LOC102724159A0A0B4J2E5 919 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 CABYRO75952 493 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 TNFAIP2Q03169 654 aa15.36■□□□□ 0.05
ABCF3-212ENST00000478288 PWP2Q15269 919 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms