RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 OR2W6PQ8NHA6 318 aa10.96□□□□□ -0.65
COL13A1-207ENST00000478219 TATDN2Q93075 761 aa10.96□□□□□ -0.65
COL13A1-207ENST00000478219 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
COL13A1-207ENST00000478219 OSBPL9Q96SU4 736 aa10.96□□□□□ -0.65
COL13A1-207ENST00000478219 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.96□□□□□ -0.65
COL13A1-207ENST00000478219 MARF1Q9Y4F3 1742 aaKnown RBP10.96□□□□□ -0.65
COL13A1-207ENST00000478219 GOLGA6L7A0A1B0GV03 622 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 ANO9A1A5B4 782 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 KLHL33A6NCF5 533 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 AP1G2O75843 785 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 KCNB1Q14721 858 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 EMC10Q5UCC4 262 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 CCDC70Q6NSX1 233 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 ATP6V1G3Q96LB4 118 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 GSDMAQ96QA5 445 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 LY9Q9HBG7 655 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 SALL4Q9UJQ4 1053 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 L3MBTL1Q9Y468 752 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.66
COL13A1-207ENST00000478219 ENO4A6NNW6 628 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 A6NNZ2 444 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 PARP1P09874 1014 aaKnown RBP10.95□□□□□ -0.66
COL13A1-207ENST00000478219 CASP7P55210 303 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 SSRP1Q08945 709 aaKnown RBP10.95□□□□□ -0.66
COL13A1-207ENST00000478219 MYO1EQ12965 1108 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 TRIM14Q14142 442 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 TUBB8Q3ZCM7 444 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 RILPL1Q5EBL4 403 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF507Q8TCN5 953 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 LMBR1Q8WVP7 490 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ZBTB10Q96DT7 871 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 NUP58Q9BVL2 599 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 EPB41L5Q9HCM4 733 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 CAPN11Q9UMQ6 739 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 TACC3Q9Y6A5 838 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 MGRN1O60291 552 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 UPP2O95045 317 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 KRT83P78385 493 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 FOXO4P98177 505 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 PAK1Q13153 545 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 MEA1Q16626 185 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 CDCA2Q69YH5 1023 aaPredicted RBP10.95□□□□□ -0.66
COL13A1-207ENST00000478219 C8orf74Q6P047 294 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF572Q7Z3I7 529 aaPredicted RBP10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ANKRD13CQ8N6S4 541 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 ABTB2Q8N961 1025 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 MAGEC3Q8TD91 643 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 NOD2Q9HC29 1040 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 SLC39A2Q9NP94 309 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 RWDD2AQ9UIY3 292 aa10.95□□□□□ -0.66
COL13A1-207ENST00000478219 FER1L4A9Z1Z3 1794 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ANKRD18BA2A2Z9 1011 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 FMNL1O95466 1100 aaPredicted RBP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 PRCPP42785 496 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ZAP70P43403 619 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ELF3P78545 371 aaPredicted RBP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 GUCY2DQ02846 1103 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 SNX1Q13596 522 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 IQCEQ6IPM2 695 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ZNF662Q6ZS27 426 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 FNBP4Q8N3X1 1017 aaPredicted RBP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 MAB21L3Q8N8X9 362 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 EHBP1Q8NDI1 1231 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ARMC2Q8NEN0 867 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 SEC16BQ96JE7 1060 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 AATFQ9NY61 560 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 CNOT8Q9UFF9 292 aaKnown RBP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 BAIAP2L1Q9UHR4 511 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 hCG_1642624A0A1W2PR95 340 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 GMNCA6NCL1 334 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 DCDC2CA8MYV0 355 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 B4DLN1 442 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 DNA2P51530 1060 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 XRCC4Q13426 336 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 DRP2Q13474 957 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 CCDC96Q2M329 555 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 TTYH3Q9C0H2 523 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 ACTR5Q9H9F9 607 aaPredicted RBP10.94□□□□□ -0.66
COL13A1-207ENST00000478219 GGA2Q9UJY4 613 aa10.94□□□□□ -0.66
COL13A1-207ENST00000478219 STK36Q9NRP7 1315 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 LGALS16A8MUM7 142 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 KIF5AQ12840 1032 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 BZW1Q7L1Q6 419 aaKnown RBP10.93□□□□□ -0.66
COL13A1-207ENST00000478219 MICAL1Q8TDZ2 1067 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 CASKIN2Q8WXE0 1202 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 GDF3Q9NR23 364 aa10.93□□□□□ -0.66
COL13A1-207ENST00000478219 SLC12A6Q9UHW9 1150 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms