RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 SNRNP48Q6IEG0 339 aaKnown RBP9.81□□□□□ -0.84
ERCC8-205ENST00000477893 MB21D1Q8N884 522 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERCC8-205ENST00000477893 RPTORQ8N122 1335 aa9.81□□□□□ -0.84
ERCC8-205ENST00000477893 RLFQ13129 1914 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 BMP3P12645 472 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
ERCC8-205ENST00000477893 GSPT1P15170 499 aaKnown RBP9.8□□□□□ -0.84
ERCC8-205ENST00000477893 MCCP23508 829 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 STAT3P40763 770 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 SNAP25P60880 206 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 CCDC96Q2M329 555 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 MFSD14CQ5VZR4 134 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 ANO1Q5XXA6 986 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 KCTD1Q719H9 257 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 TBC1D10CQ8IV04 446 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 TRMT44Q8IYL2 757 aaKnown RBP9.8□□□□□ -0.84
ERCC8-205ENST00000477893 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 PAWRQ96IZ0 340 aaKnown RBP9.8□□□□□ -0.84
ERCC8-205ENST00000477893 MMP19Q99542 508 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 MROH8Q9H579 483 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
ERCC8-205ENST00000477893 IL17RBQ9NRM6 502 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 MYH4Q9Y623 1939 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 NEDD4P46934 1319 aa9.8□□□□□ -0.84
ERCC8-205ENST00000477893 TMEM232C9JQI7 657 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 H0YGN5 161 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 COBLO75128 1261 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 ZBED4O75132 1171 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 FCER1AP12319 257 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 TAL1P17542 331 aaPredicted RBP9.79□□□□□ -0.84
ERCC8-205ENST00000477893 SLC1A4P43007 532 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
ERCC8-205ENST00000477893 DSG2Q14126 1118 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 ALX1Q15699 326 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 MAP3K21Q5TCX8 1036 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 CCDC174Q6PII3 467 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 SKAP1Q86WV1 359 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 GMCL1P1Q8NEA9 526 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 SHCBP1Q8NEM2 672 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 ZKSCAN3Q9BRR0 538 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 SLC4A5Q9BY07 1137 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 IL25Q9H293 177 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 ANAPC4Q9UJX5 808 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 COL11A1P12107 1806 aaPredicted RBP9.79□□□□□ -0.84
ERCC8-205ENST00000477893 PARP14Q460N5 1801 aa9.79□□□□□ -0.84
ERCC8-205ENST00000477893 FRMPD2Q68DX3 1309 aaPredicted RBP9.79□□□□□ -0.84
ERCC8-205ENST00000477893 HIP1O00291 1037 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 ORC4O43929 436 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 SLC25A27O95847 323 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 KCTD2Q14681 263 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 PRAMEF19Q5SWL8 479 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 MFSD6Q6ZSS7 791 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 RIOX2Q8IUF8 465 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 PRPF38AQ8NAV1 312 aaKnown RBP9.78□□□□□ -0.84
ERCC8-205ENST00000477893 TRPV1Q8NER1 839 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 MKL1Q969V6 931 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 HTATIP2Q9BUP3 242 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 TEX13BQ9BXU2 312 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 CRISPLD2Q9H0B8 497 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 FEM1BQ9UK73 627 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 ZNF214Q9UL59 606 aaPredicted RBP9.78□□□□□ -0.84
ERCC8-205ENST00000477893 ADAMTS5Q9UNA0 930 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
ERCC8-205ENST00000477893 ZNF213O14771 459 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 STRNO43815 780 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 STAT2P52630 851 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 AKNAD1Q5T1N1 836 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 NECAB2Q7Z6G3 386 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 UBE2Q1Q7Z7E8 422 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 C7orf61Q8IZ16 206 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 MAML3Q96JK9 1138 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 C11orf49Q9H6J7 331 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 GPCPD1Q9NPB8 672 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 GPHNQ9NQX3 736 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-205ENST00000477893 SLC5A4Q9NY91 659 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 ZNF236Q9UL36 1845 aa9.77□□□□□ -0.85
ERCC8-205ENST00000477893 B4E1Z4 1266 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 EVI5O60447 810 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 KDM4AO75164 1064 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 HOXC6P09630 235 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 SLC16A2P36021 539 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 TTBK2Q6IQ55 1244 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 ANKRD35Q8N283 1001 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 STAG1Q8WVM7 1258 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 LENG1Q96BZ8 264 aaPredicted RBP9.76□□□□□ -0.85
ERCC8-205ENST00000477893 DDX11Q96FC9 970 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 AGBL1Q96MI9 1066 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 RNF41Q9H4P4 317 aaPredicted RBP9.76□□□□□ -0.85
ERCC8-205ENST00000477893 SLC38A10Q9HBR0 1119 aa9.76□□□□□ -0.85
ERCC8-205ENST00000477893 DDX20Q9UHI6 824 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms