RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SSH1Q8WYL5 1049 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 FGD4Q96M96 766 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 KATNBL1Q9H079 304 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 VCPKMTQ9H867 229 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 SUGCTQ9HAC7 445 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 PIH1D3Q9NQM4 214 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 FBXO28Q9NVF7 368 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 RIPK3Q9Y572 518 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 ASTN1O14525 1302 aa8.94□□□□□ -0.98
SPTLC1-205ENST00000477888 MPHOSPH10O00566 681 aaKnown RBP8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 CYP7A1P22680 504 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 EVX2Q03828 476 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 ZP2Q05996 745 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 TMEM179Q6ZVK1 233 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 DEFB128Q7Z7B8 93 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 POTEDQ86YR6 584 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 CERS3Q8IU89 383 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 MIGA1Q8NAN2 632 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 GDPD5Q8WTR4 605 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 DDX11Q96FC9 970 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 ALDH8A1Q9H2A2 487 aaPredicted RBP8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 PPP1R9AQ9ULJ8 1098 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 HDAC5Q9UQL6 1122 aa8.93□□□□□ -0.98
SPTLC1-205ENST00000477888 A0A0G2JMZ2 1700 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ZNF536O15090 1300 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 LCHNA4D1U4 455 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 SRGAP3O43295 1099 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 GFRA3O60609 400 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 CYP2C9P11712 490 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ACTN1P12814 892 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ZAP70P43403 619 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 PTPN5P54829 565 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 PSMC6P62333 389 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 TCF15Q12870 199 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 MTX1Q13505 466 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 FSCN1Q16658 493 aaKnown RBP8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ARMCX2Q7L311 632 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 BMP8AQ7Z5Y6 402 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 CLEC10AQ8IUN9 316 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ALG13Q9NP73 1137 aaKnown RBP8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 PRKAG3Q9UGI9 489 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ZFHX2Q9C0A1 2572 aaPredicted RBP8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ZDBF2Q9HCK1 2354 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 BRWD1Q9NSI6 2320 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 ZNF318Q5VUA4 2279 aa8.92□□□□□ -0.98
SPTLC1-205ENST00000477888 TRIOO75962 3097 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 POLR3DP05423 398 aaPredicted RBP8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 SUPT20HL2P0C7V6 817 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 RFC2P35250 354 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 ERVK-21P61565 698 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 TNFAIP2Q03169 654 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 HERC4Q5GLZ8 1057 aaPredicted RBP8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 CCDC144CPQ8IYA2 1237 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 ZNF512BQ96KM6 892 aaPredicted RBP8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 MEIS3Q99687 375 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 PRRX2Q99811 253 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 RIOK1Q9BRS2 568 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 TEX13BQ9BXU2 312 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 TRMT13Q9NUP7 481 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 GTF3C3Q9Y5Q9 886 aa8.91□□□□□ -0.98
SPTLC1-205ENST00000477888 H3BQ06 376 aaPredicted RBP8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 ATP2A1O14983 1001 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 DYNC1LI2O43237 492 aaPredicted RBP8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 IQCF3P0C7M6 154 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 AKR1B1P15121 316 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 SMPD1P17405 629 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 PTGS1P23219 599 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 IRS1P35568 1242 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 ICA1Q05084 483 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 COL19A1Q14993 1142 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 CCDC158Q5M9N0 1113 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 TTC39AQ5SRH9 613 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 SNRNP48Q6IEG0 339 aaKnown RBP8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 TLK2Q86UE8 772 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 ADHFE1Q8IWW8 467 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 DBNDD2Q9BQY9 259 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 UPF3BQ9BZI7 483 aaKnown RBP8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 ARHGEF10LQ9HCE6 1279 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 Q9Y3F1 56 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
SPTLC1-205ENST00000477888 GBF1Q92538 1859 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 TNKSO95271 1327 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 ZEB2O60315 1214 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 IDH1O75874 414 aaKnown RBP8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 BAIAP3O94812 1187 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 EEF2P13639 858 aaKnown RBP8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 GPNMBQ14956 572 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 PKN1Q16512 942 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 NOL8Q76FK4 1167 aaKnown RBP8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 ERMP1Q7Z2K6 904 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 TMCO2Q7Z6W1 182 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 EDAQ92838 391 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 TGS1Q96RS0 853 aaKnown RBP8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 GPR108Q9NPR9 543 aa8.89□□□□□ -0.99
SPTLC1-205ENST00000477888 MCM9Q9NXL9 1143 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms